Cow genome map
Conread name: | rsag032_k21.y1 |
Conread position: | 1-235 |
Cow position: | chr10:19715429-19715188 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 178 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-315 |
Cow position: | chr10:22100858-22101183 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 1-361 |
Cow position: | chr10:123933-124300 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 41 |
Conread position: | 1-364 |
Cow position: | chr10:1375152-1375528 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 37 |
Conread position: | 1-364 |
Cow position: | chr10:7283064-7282692 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 1-364 |
Cow position: | chr10:8289584-8289976 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 275 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 56, 326 |
Conread position: | 1-364 |
Cow position: | chr10:19143723-19143345 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:21486531-21486908 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:29846996-29846616 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 38 |
Conread position: | 1-364 |
Cow position: | chr10:32650356-32650726 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:37060545-37060917 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:37769441-37769816 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 26 |
Conread position: | 1-364 |
Cow position: | chr10:38345748-38345369 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:38538875-38538504 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr10:57990348-57989970 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 1-364 |
Cow position: | chr10:62409237-62408862 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 2-263 |
Cow position: | chr10:4499333-4499592 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 184 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 156, 36 |
Conread position: | 2-364 |
Cow position: | chr10:39041688-39041312 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 2-365 |
Cow position: | chr10:60489287-60489654 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 36 |
Conread position: | 3-364 |
Cow position: | chr10:19511223-19511599 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 20 |
Conread position: | 5-358 |
Cow position: | chr10:41157075-41157435 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-364 |
Cow position: | chr10:4192594-4192224 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-364 |
Cow position: | chr10:14859603-14859969 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 6-363 |
Cow position: | chr10:3543948-3543585 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 51, 27 |
Conread position: | 10-364 |
Cow position: | chr10:11686037-11685674 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 11-364 |
Cow position: | chr10:29633221-29632869 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 16 |
Conread position: | 13-308 |
Cow position: | chr10:34318630-34318334 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 208 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 44, 24 |
Conread position: | 13-362 |
Cow position: | chr10:38847004-38847358 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 25 |
Conread position: | 13-362 |
Cow position: | chr10:41352126-41351762 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 244 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 44, 26 |
Conread position: | 13-364 |
Cow position: | chr10:62216234-62216600 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 27 |
Conread position: | 14-364 |
Cow position: | chr10:41876551-41876912 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 261 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 43, 24 |
Conread position: | 15-359 |
Cow position: | chr10:39179422-39179772 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 23 |
Conread position: | 15-364 |
Cow position: | chr10:14803464-14803828 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 23 |
Conread position: | 15-364 |
Cow position: | chr10:39817716-39817357 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 23 |
Conread position: | 18-364 |
Cow position: | chr10:276225-276587 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 18-364 |
Cow position: | chr10:29695879-29696230 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 20-329 |
Cow position: | chr10:54967500-54967189 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 202 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 68, 18 |
Conread position: | 25-359 |
Cow position: | chr10:280981-280631 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-360 |
Cow position: | chr10:25565600-25565256 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 25-364 |
Cow position: | chr10:21401028-21400678 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr10:38546579-38546231 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 31 |
Conread position: | 25-364 |
Cow position: | chr10:51952963-51952612 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 25-364 |
Cow position: | chr10:57559908-57559555 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 249 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 29-364 |
Cow position: | chr10:54059704-54059361 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 9 |
Conread position: | 30-364 |
Cow position: | chr10:25359045-25359392 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 64 |
Conread position: | 30-364 |
Cow position: | chr10:34685537-34685887 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 30-364 |
Cow position: | chr10:62777983-62778339 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 31-359 |
Cow position: | chr10:55092753-55093099 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 246 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 8, 13 |
Conread position: | 31-362 |
Cow position: | chr10:25498000-25498343 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 9 |
Conread position: | 38-364 |
Cow position: | chr10:32577952-32578296 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 41-364 |
Cow position: | chr10:10478476-10478155 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 84 |
Conread position: | 57-363 |
Cow position: | chr10:61297005-61297319 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 230 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 81, 19 |
Conread position: | 60-364 |
Cow position: | chr10:42628349-42628654 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 220 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 91, 62 |
Conread position: | 148-286 |
Cow position: | chr10:50018286-50018147 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 180-363 |
Cow position: | chr10:13366050-13365858 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 143 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.