Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-235
Cow position: chr10:19715429-19715188 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 37

Conread position: 1-315
Cow position: chr10:22100858-22101183 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 19

Conread position: 1-361
Cow position: chr10:123933-124300 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chr10:1375152-1375528 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position: chr10:7283064-7282692 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position: chr10:8289584-8289976 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 56, 326

Conread position: 1-364
Cow position: chr10:19143723-19143345 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:21486531-21486908 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:29846996-29846616 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 38

Conread position: 1-364
Cow position: chr10:32650356-32650726 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:37060545-37060917 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:37769441-37769816 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 1-364
Cow position: chr10:38345748-38345369 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:38538875-38538504 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chr10:57990348-57989970 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chr10:62409237-62408862 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-263
Cow position: chr10:4499333-4499592 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 156, 36

Conread position: 2-364
Cow position: chr10:39041688-39041312 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-365
Cow position: chr10:60489287-60489654 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 3-364
Cow position: chr10:19511223-19511599 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 5-358
Cow position: chr10:41157075-41157435 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr10:4192594-4192224 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position: chr10:14859603-14859969 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-363
Cow position: chr10:3543948-3543585 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 27

Conread position: 10-364
Cow position: chr10:11686037-11685674 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 11-364
Cow position: chr10:29633221-29632869 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 13-308
Cow position: chr10:34318630-34318334 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 24

Conread position: 13-362
Cow position: chr10:38847004-38847358 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 13-362
Cow position: chr10:41352126-41351762 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 26

Conread position: 13-364
Cow position: chr10:62216234-62216600 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 14-364
Cow position: chr10:41876551-41876912 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 24

Conread position: 15-359
Cow position: chr10:39179422-39179772 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position: chr10:14803464-14803828 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chr10:39817716-39817357 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 18-364
Cow position: chr10:276225-276587 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chr10:29695879-29696230 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 20-329
Cow position: chr10:54967500-54967189 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 18

Conread position: 25-359
Cow position: chr10:280981-280631 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-360
Cow position: chr10:25565600-25565256 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr10:21401028-21400678 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chr10:38546579-38546231 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 31

Conread position: 25-364
Cow position: chr10:51952963-51952612 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chr10:57559908-57559555 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 29-364
Cow position: chr10:54059704-54059361 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 30-364
Cow position: chr10:25359045-25359392 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 30-364
Cow position: chr10:34685537-34685887 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chr10:62777983-62778339 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 31-359
Cow position: chr10:55092753-55093099 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 8, 13

Conread position: 31-362
Cow position: chr10:25498000-25498343 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-364
Cow position: chr10:32577952-32578296 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 41-364
Cow position: chr10:10478476-10478155 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 57-363
Cow position: chr10:61297005-61297319 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 81, 19

Conread position: 60-364
Cow position: chr10:42628349-42628654 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 91, 62

Conread position: 148-286
Cow position: chr10:50018286-50018147 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 180-363
Cow position: chr10:13366050-13365858 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.