Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-189
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 37

Conread position: 1-278
Cow position:
Alignm length: 288
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 41

Conread position: 1-356
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 1-364
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 1-364
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-363
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 68

Conread position: 2-364
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 4-364
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-320
Cow position:
Alignm length: 341
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-352
Cow position:
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 5-359
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 7-364
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 9-241
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 29

Conread position: 9-360
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 9-364
Cow position:
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 10-364
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 12-364
Cow position:
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 5

Conread position: 15-359
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-239
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 22

Conread position: 16-263
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 12

Conread position: 16-286
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 17-361
Cow position:
Alignm length: 355
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 17-364
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 20-361
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 18

Conread position: 20-362
Cow position:
Alignm length: 359
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 18

Conread position: 21-326
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 137, 17

Conread position: 21-364
Cow position:
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 25-295
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-361
Cow position:
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 25-364
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 13

Conread position: 29-325
Cow position:
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 30-358
Cow position:
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 131

Conread position: 30-359
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 188

Conread position: 30-364
Cow position:
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 223

Conread position: 30-364
Cow position:
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 30-364
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 209

Conread position: 30-364
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 31-237
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 109, 7

Conread position: 31-364
Cow position:
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 33-364
Cow position:
Alignm length: 355
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 7

Conread position: 34-304
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 35-361
Cow position:
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 35-364
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 215

Conread position: 38-358
Cow position:
Alignm length: 324
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 70

Conread position: 38-363
Cow position:
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 38-364
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 39-311
Cow position:
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 217

Conread position: 45-240
Cow position:
Alignm length: 198
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 113, 76

Conread position: 50-331
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 7, 50

Conread position: 50-364
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 60-311
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 70-357
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 145

Conread position: 75-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 168, 73

Conread position: 85-364
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 98-364
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 92

Conread position: 100-359
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 39, 228

Conread position: 110-364
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 168

Conread position: 146-363
Cow position:
Alignm length: 222
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 107, 15

Conread position: 154-364
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 18

Conread position: 177-364
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 97

Conread position: 187-364
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 231-361
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.