Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-170
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 37

Conread position: 1-332
Cow position:
Alignm length: 350
Alignm identity: 236
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 37

Conread position: 1-347
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-360
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 134, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 1-364
Cow position:
Alignm length: 383
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 36

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 2-160
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 37

Conread position: 2-332
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-334
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-364
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 2-364
Cow position:
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-286
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 24

Conread position: 4-364
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-225
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 33

Conread position: 5-261
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 33

Conread position: 5-308
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 34

Conread position: 5-319
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 5-358
Cow position:
Alignm length: 367
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 5-359
Cow position:
Alignm length: 366
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 5-364
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 5-364
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-365
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-332
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 34

Conread position: 6-361
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 32

Conread position: 6-364
Cow position:
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 6-364
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-358
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 13-330
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 25

Conread position: 13-361
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 25

Conread position: 15-364
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 16-332
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 9

Conread position: 16-364
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 22

Conread position: 17-275
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 21

Conread position: 17-283
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 41, 21

Conread position: 17-332
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 17-364
Cow position:
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 21

Conread position: 18-364
Cow position:
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 100

Conread position: 20-356
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 119, 18

Conread position: 21-364
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 20

Conread position: 21-364
Cow position:
Alignm length: 355
Alignm identity: 229
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 17

Conread position: 23-364
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-364
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 14

Conread position: 25-308
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 14

Conread position: 25-357
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position:
Alignm length: 353
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-359
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 25-364
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 114, 13

Conread position: 26-292
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 179

Conread position: 27-364
Cow position:
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 29-286
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 29-330
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 9

Conread position: 29-364
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 246

Conread position: 29-364
Cow position:
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 29-365
Cow position:
Alignm length: 356
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 43

Conread position: 30-280
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 200

Conread position: 30-329
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 30-364
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-364
Cow position:
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 33-364
Cow position:
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 34-331
Cow position:
Alignm length: 312
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 34-364
Cow position:
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 36-364
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 38-359
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-360
Cow position:
Alignm length: 331
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 304

Conread position: 38-364
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 33

Conread position: 39-359
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 39-364
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 40-362
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 284

Conread position: 40-363
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 171

Conread position: 42-329
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 57

Conread position: 50-235
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 50-364
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 56-360
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 59-364
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 60-364
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 43

Conread position: 60-365
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 62-357
Cow position:
Alignm length: 301
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 178, 63

Conread position: 80-356
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 166

Conread position: 85-364
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 113-361
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 219, 7

Conread position: 151-363
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 78

Conread position: 159-365
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.