Cow genome map


           Conread name:
           rsag032_k21.y1
        

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               5-354
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               6-359
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               6-364
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               9-364
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               15-357
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               15-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               15-359
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               15-359
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               18-247
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               18-333
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               21-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               21-362
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               21-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 188
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-364
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               28-364
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               29-361
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               30-363
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 357
               

               Conread position:
               30-364
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               31-358
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               38-247
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 181
               

               Conread position:
               40-332
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               40-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               45-364
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 41
               

               Conread position:
               47-279
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               95-364
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               103-361
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               106-364
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 158
               

               Conread position:
               128-364
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 13
               

               Conread position:
               131-329
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               141-359
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               102, 5
               

               Conread position:
               159-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               177-363
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               177-364
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               236-364
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 6
               

               Conread position:
               236-364
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.