Cow genome map
| Conread name: | rsag032_k21.y1 |
| Conread position: | 1-232 |
| Cow position: | chr19:33872882-33873117 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 1-364 |
| Cow position: | chr19:171849-172228 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 1-364 |
| Cow position: | chr19:203601-203978 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 1-364 |
| Cow position: | chr19:4385126-4385498 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 1-364 |
| Cow position: | chr19:10672668-10672290 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr19:30371916-30372299 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 1-364 |
| Cow position: | chr19:33941252-33941629 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 1-364 |
| Cow position: | chr19:40852792-40852413 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 2-364 |
| Cow position: | chr19:32223769-32223422 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 3-336 |
| Cow position: | chr19:261076-261422 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 5-168 |
| Cow position: | chr19:544248-544086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 5-329 |
| Cow position: | chr19:37549-37875 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 5-362 |
| Cow position: | chr19:359850-359489 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 5-364 |
| Cow position: | chr19:76588-76236 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 6-351 |
| Cow position: | chr19:40888001-40887641 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 6-357 |
| Cow position: | chr19:28592926-28593287 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 6-359 |
| Cow position: | chr19:685498-685855 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 6-361 |
| Cow position: | chr19:30754820-30755192 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 149, 33 |
| Conread position: | 13-267 |
| Cow position: | chr19:36477011-36477271 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 13-360 |
| Cow position: | chr19:35376216-35376572 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 13-364 |
| Cow position: | chr19:439996-439626 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 15-364 |
| Cow position: | chr19:7341724-7342085 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 16-364 |
| Cow position: | chr19:34076-34437 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 17-330 |
| Cow position: | chr19:42649411-42649096 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 18-363 |
| Cow position: | chr19:31341379-31341722 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 21-363 |
| Cow position: | chr19:32665192-32665546 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 23-363 |
| Cow position: | chr19:20125294-20125635 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 24-364 |
| Cow position: | chr19:29209227-29209578 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 25-329 |
| Cow position: | chr19:772272-772578 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 25-359 |
| Cow position: | chr19:32244342-32244696 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 25-364 |
| Cow position: | chr19:32212398-32212053 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 28-364 |
| Cow position: | chr19:548061-548404 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 29-331 |
| Cow position: | chr19:36036033-36036340 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 29-364 |
| Cow position: | chr19:1031780-1032119 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 31-364 |
| Cow position: | chr19:4252689-4252341 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 37-359 |
| Cow position: | chr19:43143389-43143728 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 289 |
| Conread position: | 37-364 |
| Cow position: | chr19:39390196-39390534 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 38-364 |
| Cow position: | chr19:52152575-52152244 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 38-364 |
| Cow position: | chr19:55078420-55078763 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 40-364 |
| Cow position: | chr19:416325-416670 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 40-364 |
| Cow position: | chr19:4533067-4532732 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 41-360 |
| Cow position: | chr19:536568-536885 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 50-312 |
| Cow position: | chr19:39688236-39688505 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 60-361 |
| Cow position: | chr19:7488010-7488327 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 265 |
| Conread position: | 100-364 |
| Cow position: | chr19:39546374-39546645 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 128-363 |
| Cow position: | chr19:561729-561489 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 143-332 |
| Cow position: | chr19:378084-377893 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 174-364 |
| Cow position: | chr19:27052943-27052752 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 197-364 |
| Cow position: | chr19:28376374-28376539 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 45, 137 |
Show alignments to all cow chromosomes.