Cow genome map


           Conread name:
           rsag032_k21.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               3-336
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               5-168
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               5-362
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               6-351
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               6-357
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               6-359
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               149, 33
               

               Conread position:
               13-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               13-360
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               13-364
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               17-330
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               21-363
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               23-363
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               24-364
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-364
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               28-364
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               29-331
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               29-364
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               31-364
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               37-359
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 289
               

               Conread position:
               37-364
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               38-364
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               38-364
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 150
               

               Conread position:
               41-360
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               50-312
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               60-361
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 265
               

               Conread position:
               100-364
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               128-363
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               143-332
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 42
               

               Conread position:
               174-364
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 138
               

               Conread position:
               197-364
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               45, 137
               
Show alignments to all cow chromosomes.