Cow genome map
| Conread name: | rsag032_k21.y1 |
| Conread position: | 1-190 |
| Cow position: | chr20:15291643-15291841 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-227 |
| Cow position: | chr20:29947781-29948016 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-247 |
| Cow position: | chr20:8004917-8004662 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 1-364 |
| Cow position: | chr20:10102945-10102575 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 1-364 |
| Cow position: | chr20:13762505-13762876 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 1-364 |
| Cow position: | chr20:23470065-23469685 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr20:23798478-23798856 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr20:27868793-27869171 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr20:30683934-30684309 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 2-351 |
| Cow position: | chr20:22206132-22206504 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 5-359 |
| Cow position: | chr20:19437564-19437927 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 5-364 |
| Cow position: | chr20:7116871-7116495 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 6-364 |
| Cow position: | chr20:5534541-5534913 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 6-364 |
| Cow position: | chr20:18315978-18315610 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 6-364 |
| Cow position: | chr20:21393173-21393537 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 6-364 |
| Cow position: | chr20:25851392-25851016 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 13-364 |
| Cow position: | chr20:12439155-12438787 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 15-242 |
| Cow position: | chr20:822367-822596 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 16-303 |
| Cow position: | chr20:11276665-11276386 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 16-364 |
| Cow position: | chr20:15064368-15064743 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 18-364 |
| Cow position: | chr20:3252527-3252161 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 20-364 |
| Cow position: | chr20:24614165-24614511 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 23-304 |
| Cow position: | chr20:3032550-3032840 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 194 |
| Conread position: | 29-364 |
| Cow position: | chr20:15098246-15097904 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 214 |
| Conread position: | 30-364 |
| Cow position: | chr20:4800019-4799677 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 30-364 |
| Cow position: | chr20:8313809-8313462 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 38-364 |
| Cow position: | chr20:28160412-28160754 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 287 |
| Conread position: | 39-331 |
| Cow position: | chr20:24516503-24516804 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 40-364 |
| Cow position: | chr20:5483827-5484164 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 42-361 |
| Cow position: | chr20:10846440-10846107 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 46-364 |
| Cow position: | chr20:3270362-3270678 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 49-364 |
| Cow position: | chr20:28565957-28565622 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 49-364 |
| Cow position: | chr20:28593393-28593720 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 60-364 |
| Cow position: | chr20:9954301-9954011 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 84 |
Show alignments to all cow chromosomes.