Cow genome map


           Conread name:
           rsag032_k21.y1
        

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 272
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               2-363
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               4-358
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               4-359
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               5-279
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               6-360
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               13-359
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               13-362
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               13-364
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               148, 25
               

               Conread position:
               14-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               15-359
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               18-332
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               18-361
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 22
               

               Conread position:
               21-157
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               25-356
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-358
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               30-363
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               30-364
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               30-364
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               31-364
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               31-364
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               37-359
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 209
               

               Conread position:
               38-359
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 206
               

               Conread position:
               38-360
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               43-295
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               77, 111
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 233
               

               Conread position:
               45-364
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               49-357
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               8, 293
               

               Conread position:
               49-363
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 261
               

               Conread position:
               60-364
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 133
               

               Conread position:
               60-364
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               62-364
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               75-332
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               129-364
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               143-364
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               163-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               78, 34
               
Show alignments to all cow chromosomes.