Cow genome map
| Conread name: | rsag032_k21.y1 |
| Conread position: | 1-225 |
| Cow position: | chr24:29186433-29186666 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-361 |
| Cow position: | chr24:148964-148613 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr24:6433865-6434247 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 1-364 |
| Cow position: | chr24:12085831-12086204 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 1-364 |
| Cow position: | chr24:19833011-19833387 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 2-332 |
| Cow position: | chr24:32330975-32331296 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 202, 36 |
| Conread position: | 2-364 |
| Cow position: | chr24:12289088-12288723 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 2-365 |
| Cow position: | chr24:15392669-15392302 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 5-199 |
| Cow position: | chr24:17314686-17314479 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 5-269 |
| Cow position: | chr24:5993339-5993069 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 5-270 |
| Cow position: | chr24:38635378-38635647 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 5-359 |
| Cow position: | chr24:6083648-6084018 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 5-360 |
| Cow position: | chr24:12224824-12224467 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 238, 15 |
| Conread position: | 5-364 |
| Cow position: | chr24:6335329-6335701 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 5-364 |
| Cow position: | chr24:12131851-12131482 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 5-364 |
| Cow position: | chr24:14384978-14384607 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 5-364 |
| Cow position: | chr24:33932999-33933372 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 12-365 |
| Cow position: | chr24:12161520-12161886 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 8 |
| Conread position: | 13-312 |
| Cow position: | chr24:6057320-6057625 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 123, 20 |
| Conread position: | 13-330 |
| Cow position: | chr24:12236703-12237023 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 13-364 |
| Cow position: | chr24:7060741-7061106 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 15-359 |
| Cow position: | chr24:6645059-6645414 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 15-359 |
| Cow position: | chr24:33739701-33739343 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 16-279 |
| Cow position: | chr24:37216369-37216651 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 16-358 |
| Cow position: | chr24:12798108-12797764 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 16-364 |
| Cow position: | chr24:14391079-14390723 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 22-329 |
| Cow position: | chr24:23098783-23098468 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 25-364 |
| Cow position: | chr24:6025445-6025089 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 25-364 |
| Cow position: | chr24:22792828-22793179 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 35-320 |
| Cow position: | chr24:17187206-17187505 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 38-212 |
| Cow position: | chr24:7712628-7712451 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 38-363 |
| Cow position: | chr24:1447244-1447562 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 38-364 |
| Cow position: | chr24:9189067-9188725 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 38-364 |
| Cow position: | chr24:12114367-12114035 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 248 |
| Conread position: | 40-364 |
| Cow position: | chr24:35838961-35838619 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 42-359 |
| Cow position: | chr24:12485650-12485316 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 47-364 |
| Cow position: | chr24:36560398-36560077 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 119 |
| Conread position: | 51-357 |
| Cow position: | chr24:36296852-36297159 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 77, 138 |
| Conread position: | 60-364 |
| Cow position: | chr24:13531848-13531530 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 227 |
| Conread position: | 143-364 |
| Cow position: | chr24:8029927-8030157 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 159-359 |
| Cow position: | chr24:16084866-16084659 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 197-364 |
| Cow position: | chr24:14584927-14585099 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 217-364 |
| Cow position: | chr24:22951988-22952142 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 219-364 |
| Cow position: | chr24:9092419-9092267 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.