Cow genome map


           Conread name:
           rsag032_k21.y1
        

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 281
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               2-363
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               6-364
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               10-364
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 22
               

               Conread position:
               17-328
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               17-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               20-361
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               21-332
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               21-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 312
               

               Conread position:
               23-168
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               25-201
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               25-364
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 13
               

               Conread position:
               25-364
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               29-364
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               30-276
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               119, 9
               

               Conread position:
               35-324
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 21
               

               Conread position:
               38-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               38-364
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               60-364
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 172
               

               Conread position:
               65-359
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 93
               

               Conread position:
               77-359
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               88-364
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               116-333
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               157-332
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               179-364
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 114
               
Show alignments to all cow chromosomes.