Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-360
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 40

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 2-323
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 2-333
Cow position:
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 2-333
Cow position:
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 37

Conread position: 2-360
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 11

Conread position: 2-364
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 2-364
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 35

Conread position: 4-364
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-359
Cow position:
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position:
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 33

Conread position: 5-361
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-364
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 23

Conread position: 5-364
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 32

Conread position: 5-364
Cow position:
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 5-364
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-287
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 96

Conread position: 6-329
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 32

Conread position: 12-332
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 22

Conread position: 13-332
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 24

Conread position: 14-364
Cow position:
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 15-359
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 15-359
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 22

Conread position: 15-364
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-363
Cow position:
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position:
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 16-364
Cow position:
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 17-357
Cow position:
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-363
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 21

Conread position: 17-364
Cow position:
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 20-330
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 224, 18

Conread position: 21-274
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 44

Conread position: 21-364
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-248
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 191

Conread position: 23-325
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 16

Conread position: 23-361
Cow position:
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 23-363
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 25-358
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 29-328
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 190

Conread position: 29-357
Cow position:
Alignm length: 348
Alignm identity: 229
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 9

Conread position: 29-364
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 16

Conread position: 29-364
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 29-364
Cow position:
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 30-357
Cow position:
Alignm length: 346
Alignm identity: 226
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 51

Conread position: 30-360
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 30-364
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 249

Conread position: 30-364
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 266

Conread position: 30-364
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 30-364
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 30-364
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 68

Conread position: 31-364
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 31-364
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 35-364
Cow position:
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 301

Conread position: 35-364
Cow position:
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 37-364
Cow position:
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 38-304
Cow position:
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 177

Conread position: 38-308
Cow position:
Alignm length: 283
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 38-331
Cow position:
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 75

Conread position: 38-359
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-360
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 38-364
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 5

Conread position: 47-332
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 47-364
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 100

Conread position: 49-364
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 258

Conread position: 50-364
Cow position:
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 278

Conread position: 58-332
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 32

Conread position: 61-329
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 81-363
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 42

Conread position: 99-360
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 149, 10

Conread position: 100-331
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 141-364
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 83

Conread position: 148-311
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 155-364
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 159-364
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 175, 68

Conread position: 179-364
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.