Cow genome map


           Conread name:
           rsag032_k21.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-361
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               5-358
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               5-360
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               6-362
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               153, 19
               

               Conread position:
               6-364
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               6-364
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               12-359
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               13-363
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               15-239
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               15-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               15-359
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               15-364
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               17-332
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               20-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               21-354
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               21-364
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               21-364
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               22-364
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               25-358
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               25-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               38-364
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 194
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               42-364
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               50-364
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               51-364
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               61-359
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               171, 80
               

               Conread position:
               61-360
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               69-309
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               79, 179
               

               Conread position:
               110-364
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               153-364
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               179-364
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               69, 16
               

               Conread position:
               230-364
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 80
               
Show alignments to all cow chromosomes.