Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-332
Cow position:
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-332
Cow position:
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-347
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position:
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-361
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 42

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 2-304
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-364
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 34

Conread position: 4-364
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 5-359
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 5-359
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 6-364
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 37

Conread position: 6-364
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 9-364
Cow position:
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 14-364
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 14-364
Cow position:
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 15-271
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 23

Conread position: 15-299
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 23

Conread position: 15-359
Cow position:
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 15-364
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 23

Conread position: 16-225
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 21

Conread position: 16-248
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 23

Conread position: 16-294
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position:
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 17-308
Cow position:
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 17-364
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 10

Conread position: 17-364
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position:
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-364
Cow position:
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 20-361
Cow position:
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 18

Conread position: 20-364
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 20-364
Cow position:
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 233

Conread position: 21-358
Cow position:
Alignm length: 348
Alignm identity: 222
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 17

Conread position: 21-362
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 21-364
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 80

Conread position: 21-364
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 304

Conread position: 22-249
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 16

Conread position: 23-364
Cow position:
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 23-364
Cow position:
Alignm length: 360
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 16

Conread position: 24-363
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 14

Conread position: 25-278
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position:
Alignm length: 319
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-358
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 13

Conread position: 25-359
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 25-359
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 18

Conread position: 25-364
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 13

Conread position: 25-364
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 25-364
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 29-364
Cow position:
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 30-358
Cow position:
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 30-364
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position:
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 210

Conread position: 31-332
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 31-363
Cow position:
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 31-364
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-359
Cow position:
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 38-359
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 38-364
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 52

Conread position: 38-365
Cow position:
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 40-364
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 155

Conread position: 45-357
Cow position:
Alignm length: 325
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 302

Conread position: 65-321
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 73-364
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 0

Conread position: 98-267
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 40

Conread position: 132-364
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 7

Conread position: 137-276
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 49

Conread position: 143-359
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 143-364
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 164-303
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 175-364
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 0

Conread position: 242-364
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 75

Show alignments to all cow chromosomes.