Cow genome map
Conread name: | rsag032_k21.y1 |
Conread position: | 1-277 |
Cow position: | chr6:24238562-24238847 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 1-360 |
Cow position: | chr6:15281032-15280657 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-360 |
Cow position: | chr6:21686412-21686773 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 26 |
Conread position: | 1-360 |
Cow position: | chr6:21971188-21971559 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-360 |
Cow position: | chr6:65841100-65841480 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 266 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-362 |
Cow position: | chr6:38231790-38232163 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:1823735-1823360 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:3278439-3278061 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:3889976-3889590 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:8201243-8201621 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:17045574-17045948 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:20561598-20561220 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 37 |
Conread position: | 1-364 |
Cow position: | chr6:29311005-29311380 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 37 |
Conread position: | 1-364 |
Cow position: | chr6:34893496-34893120 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:36525556-36525932 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:50497939-50497569 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 37 |
Conread position: | 1-364 |
Cow position: | chr6:64713061-64713431 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 258 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 1-364 |
Cow position: | chr6:64714628-64715005 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 15 |
Conread position: | 1-365 |
Cow position: | chr6:55544816-55544436 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 41 |
Conread position: | 2-332 |
Cow position: | chr6:2885757-2886077 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 36 |
Conread position: | 2-362 |
Cow position: | chr6:59919761-59919391 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 2-364 |
Cow position: | chr6:913144-913518 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 36 |
Conread position: | 2-364 |
Cow position: | chr6:39437156-39437530 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 11 |
Conread position: | 2-364 |
Cow position: | chr6:65900397-65900029 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 262 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 59, 36 |
Conread position: | 3-363 |
Cow position: | chr6:6476937-6476566 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 35 |
Conread position: | 4-360 |
Cow position: | chr6:65908947-65909312 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 34 |
Conread position: | 4-364 |
Cow position: | chr6:3488878-3488511 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 34 |
Conread position: | 4-364 |
Cow position: | chr6:5951721-5951347 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 23 |
Conread position: | 5-227 |
Cow position: | chr6:52735919-52736147 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-364 |
Cow position: | chr6:6566127-6566502 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-364 |
Cow position: | chr6:12093338-12092973 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-364 |
Cow position: | chr6:30478614-30478980 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 5-364 |
Cow position: | chr6:43617230-43617606 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 6-364 |
Cow position: | chr6:2554220-2554597 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 6-364 |
Cow position: | chr6:15141661-15141286 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 17 |
Conread position: | 6-364 |
Cow position: | chr6:30275666-30275289 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 17 |
Conread position: | 7-364 |
Cow position: | chr6:27468776-27469141 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 16 |
Conread position: | 10-359 |
Cow position: | chr6:26671337-26670979 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 15 |
Conread position: | 13-311 |
Cow position: | chr6:51190072-51190373 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 196 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 44, 25 |
Conread position: | 13-360 |
Cow position: | chr6:701473-701840 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 15-358 |
Cow position: | chr6:68026306-68026665 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 22 |
Conread position: | 15-359 |
Cow position: | chr6:7141940-7141587 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 23 |
Conread position: | 15-359 |
Cow position: | chr6:17598757-17598395 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 23 |
Conread position: | 15-362 |
Cow position: | chr6:48367955-48368279 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 239 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 120, 23 |
Conread position: | 15-364 |
Cow position: | chr6:13103584-13103947 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 254 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 42, 23 |
Conread position: | 15-364 |
Cow position: | chr6:28062873-28063227 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 23 |
Conread position: | 15-364 |
Cow position: | chr6:39907681-39908039 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 23 |
Conread position: | 16-364 |
Cow position: | chr6:10054150-10054502 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 22 |
Conread position: | 16-364 |
Cow position: | chr6:40314439-40314791 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 22 |
Conread position: | 17-233 |
Cow position: | chr6:28106238-28106016 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 40, 21 |
Conread position: | 17-303 |
Cow position: | chr6:7180135-7179853 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 10 |
Conread position: | 17-333 |
Cow position: | chr6:42360139-42359824 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 213 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 231, 22 |
Conread position: | 17-364 |
Cow position: | chr6:27530472-27530114 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 21 |
Conread position: | 18-364 |
Cow position: | chr6:65007373-65007725 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 18-364 |
Cow position: | chr6:68362787-68362430 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 22 |
Conread position: | 25-329 |
Cow position: | chr6:27169111-27169428 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 227 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-329 |
Cow position: | chr6:28491979-28491662 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 25-358 |
Cow position: | chr6:57870469-57870120 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-359 |
Cow position: | chr6:1405697-1405352 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-359 |
Cow position: | chr6:34126886-34127233 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 249 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr6:2374246-2374593 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr6:13978078-13978410 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 242 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr6:40274794-40275148 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr6:44028590-44028937 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 248 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 32, 13 |
Conread position: | 25-364 |
Cow position: | chr6:65822597-65822237 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 249 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 29-305 |
Cow position: | chr6:60384534-60384815 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 183 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 113, 256 |
Conread position: | 29-364 |
Cow position: | chr6:35421023-35420693 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 47 |
Conread position: | 30-332 |
Cow position: | chr6:63198596-63198289 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 203 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 30-364 |
Cow position: | chr6:42926919-42927273 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 16 |
Conread position: | 31-363 |
Cow position: | chr6:19453474-19453811 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 32-330 |
Cow position: | chr6:66231356-66231656 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 215 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 216 |
Conread position: | 34-361 |
Cow position: | chr6:2955408-2955069 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 216 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 183 |
Conread position: | 35-360 |
Cow position: | chr6:42723376-42723039 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 170 |
Conread position: | 38-247 |
Cow position: | chr6:33459127-33459352 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 19, 144 |
Conread position: | 38-333 |
Cow position: | chr6:11353285-11353597 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 206 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 90, 18 |
Conread position: | 38-364 |
Cow position: | chr6:13943460-13943800 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 65 |
Conread position: | 38-364 |
Cow position: | chr6:28274535-28274873 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 186 |
Conread position: | 38-364 |
Cow position: | chr6:65927492-65927826 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 39-364 |
Cow position: | chr6:58409360-58409023 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 242 |
Conread position: | 40-332 |
Cow position: | chr6:11278144-11277846 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 58 |
Conread position: | 40-361 |
Cow position: | chr6:42564496-42564830 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 216 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 18, 64 |
Conread position: | 40-364 |
Cow position: | chr6:65880415-65880756 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 47-364 |
Cow position: | chr6:8761744-8761411 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 56-364 |
Cow position: | chr6:10559072-10558770 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 227 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 108, 38 |
Conread position: | 126-360 |
Cow position: | chr6:40554944-40554707 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 24, 107 |
Conread position: | 132-364 |
Cow position: | chr6:37115788-37116028 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 29, 21 |
Conread position: | 164-364 |
Cow position: | chr6:33388519-33388723 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 189-360 |
Cow position: | chr6:13317776-13317600 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 205-364 |
Cow position: | chr6:49520667-49520510 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 127, 24 |
Show alignments to all cow chromosomes.