Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-277
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 26

Conread position: 1-360
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 26

Conread position: 1-360
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-360
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 37

Conread position: 1-362
Cow position:
Alignm length: 376
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 15

Conread position: 1-364
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 1-365
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-332
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-362
Cow position:
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 2-364
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-364
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 2-364
Cow position:
Alignm length: 376
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 59, 36

Conread position: 3-363
Cow position:
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 35

Conread position: 4-360
Cow position:
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 34

Conread position: 4-364
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 23

Conread position: 5-227
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 5-364
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-364
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 6-364
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 6-364
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 7-364
Cow position:
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 10-359
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 13-360
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 15-358
Cow position:
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 15-359
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 23

Conread position: 15-359
Cow position:
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-362
Cow position:
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 23

Conread position: 15-364
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-364
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 16-364
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 16-364
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 22

Conread position: 17-233
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 21

Conread position: 17-303
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 17-333
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 231, 22

Conread position: 17-364
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-364
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 25-329
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-358
Cow position:
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 29-305
Cow position:
Alignm length: 283
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 256

Conread position: 29-364
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 30-332
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 30-364
Cow position:
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 31-363
Cow position:
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 32-330
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 216

Conread position: 34-361
Cow position:
Alignm length: 341
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 183

Conread position: 35-360
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 170

Conread position: 38-247
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 144

Conread position: 38-333
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 18

Conread position: 38-364
Cow position:
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 38-364
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 186

Conread position: 38-364
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-364
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 242

Conread position: 40-332
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 40-361
Cow position:
Alignm length: 337
Alignm identity: 216
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 64

Conread position: 40-364
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 47-364
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 56-364
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 108, 38

Conread position: 126-360
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 107

Conread position: 132-364
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 21

Conread position: 164-364
Cow position:
Alignm length: 205
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 189-360
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 205-364
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 24

Show alignments to all cow chromosomes.