Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-188
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 25

Conread position: 1-325
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-357
Cow position:
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-358
Cow position:
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-360
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 1-361
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-361
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 169, 36

Conread position: 2-363
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 2-363
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 2-364
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 4-231
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 4-364
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 4-364
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 5-329
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 33

Conread position: 5-363
Cow position:
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 5-364
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-364
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 34

Conread position: 9-364
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 12-364
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 26

Conread position: 13-364
Cow position:
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 94

Conread position: 14-364
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 15-357
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 15-359
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 16-340
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 16-364
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 16-364
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 17-364
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position:
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 17-364
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 17-364
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 21

Conread position: 17-364
Cow position:
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 17-364
Cow position:
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-267
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 21

Conread position: 18-364
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 20-361
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 237, 18

Conread position: 21-202
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 8

Conread position: 25-286
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 32, 13

Conread position: 25-329
Cow position:
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position:
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 28-168
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 141

Conread position: 29-194
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 29-363
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 154

Conread position: 29-364
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 30-358
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 100, 187

Conread position: 30-364
Cow position:
Alignm length: 348
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 183

Conread position: 30-364
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 135

Conread position: 31-310
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 9

Conread position: 31-360
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 38-304
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 38-359
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 40-364
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 105, 337

Conread position: 62-364
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 90-360
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 95-357
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 142-361
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 192, 30

Conread position: 180-364
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 190-364
Cow position:
Alignm length: 180
Alignm identity: 143
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 217-361
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 132

Conread position: 234-365
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 86

Show alignments to all cow chromosomes.