Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-273
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 37

Conread position: 1-360
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-259
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 36

Conread position: 2-329
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 2-332
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 2-332
Cow position:
Alignm length: 341
Alignm identity: 234
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 36

Conread position: 2-359
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-359
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 2-360
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 111, 27

Conread position: 2-362
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 2-364
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 2-364
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 125, 18

Conread position: 5-260
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 5-358
Cow position:
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position:
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-362
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 5-364
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 33

Conread position: 5-364
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-294
Cow position:
Alignm length: 291
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 14

Conread position: 6-364
Cow position:
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 6-364
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 6-364
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 11-363
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 12-364
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 13-364
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 15-319
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-357
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-358
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-359
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-359
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 15-364
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-364
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 15-364
Cow position:
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 16-168
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 16-273
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 261

Conread position: 16-357
Cow position:
Alignm length: 364
Alignm identity: 245
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 23

Conread position: 16-364
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 23

Conread position: 17-364
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-362
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 20-279
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 18

Conread position: 20-291
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 18

Conread position: 21-353
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 21-364
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 18

Conread position: 21-364
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 23-336
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-316
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 33

Conread position: 25-221
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 13

Conread position: 25-238
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 25-295
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 159

Conread position: 25-304
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 25-307
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 13

Conread position: 25-316
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 13

Conread position: 25-325
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 102, 13

Conread position: 25-329
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-357
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position:
Alignm length: 355
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 13

Conread position: 25-359
Cow position:
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 25-364
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position:
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 26-308
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 12

Conread position: 28-359
Cow position:
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 28-364
Cow position:
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 29-364
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 29-364
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 112, 9

Conread position: 29-364
Cow position:
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 30-359
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 28

Conread position: 30-359
Cow position:
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 30-364
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position:
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 30-364
Cow position:
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 30-364
Cow position:
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-330
Cow position:
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position:
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 32-364
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 34-364
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 38-307
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 38-329
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 236

Conread position: 38-364
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 38-364
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 245

Conread position: 38-364
Cow position:
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position:
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 193

Conread position: 40-315
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 266

Conread position: 40-364
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 40-364
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 41-364
Cow position:
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 45-202
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 45-331
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 12

Conread position: 46-358
Cow position:
Alignm length: 334
Alignm identity: 237
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 203

Conread position: 49-364
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 277

Conread position: 56-364
Cow position:
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 60-358
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 62-364
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 20

Conread position: 63-364
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 67-364
Cow position:
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 69-364
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 171

Conread position: 72-364
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 34

Conread position: 106-364
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 114-364
Cow position:
Alignm length: 255
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 136-308
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 11

Conread position: 137-364
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 66

Conread position: 141-331
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 143-293
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 144-275
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 9

Conread position: 155-363
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 159-315
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 175-359
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 175-364
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 185

Conread position: 230-364
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 14

Conread position: 231-364
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 240-364
Cow position:
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.