Cow genome map

Conread name: rsag032_k21.y1

Conread position: 1-273
Cow position: chrX:23276465-23276748 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 37

Conread position: 1-360
Cow position: chrX:30232758-30232384 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:1546280-1546659 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:2483290-2482914 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 37

Conread position: 1-364
Cow position: chrX:13413770-13413391 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:15598275-15598654 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:16698647-16699025 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:18955169-18954799 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:21489584-21489955 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 19

Conread position: 1-364
Cow position: chrX:23392256-23391877 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:23456225-23455850 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-364
Cow position: chrX:24485068-24484687 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:26527321-26527700 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 1-364
Cow position: chrX:26759245-26758866 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 1-364
Cow position: chrX:29854218-29853839 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-259
Cow position: chrX:16565221-16565490 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 36

Conread position: 2-329
Cow position: chrX:8963703-8963373 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 2-332
Cow position: chrX:2142661-2142988 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 2-332
Cow position: chrX:13052035-13052356 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 36

Conread position: 2-359
Cow position: chrX:21270819-21270466 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 2-359
Cow position: chrX:22526254-22525885 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 2-360
Cow position: chrX:31079881-31080252 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 111, 27

Conread position: 2-362
Cow position: chrX:19185598-19185234 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 2-364
Cow position: chrX:970122-970490 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 2-364
Cow position: chrX:30174309-30173938 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 125, 18

Conread position: 5-260
Cow position: chrX:34987997-34988262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 5-358
Cow position: chrX:22619964-22619595 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-359
Cow position: chrX:24088752-24089121 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-362
Cow position: chrX:20698913-20698554 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 33

Conread position: 5-364
Cow position: chrX:30056026-30056395 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 33

Conread position: 5-364
Cow position: chrX:38145410-38145784 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 6-294
Cow position: chrX:29794753-29794475 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 14

Conread position: 6-364
Cow position: chrX:11669079-11668717 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 6-364
Cow position: chrX:24325800-24325421 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 6-364
Cow position: chrX:30710708-30711078 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 10

Conread position: 11-363
Cow position: chrX:16017769-16017418 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 12-364
Cow position: chrX:28635057-28634691 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 13-364
Cow position: chrX:18532363-18532722 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 13-364
Cow position: chrX:27426960-27426592 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 15-319
Cow position: chrX:21339762-21340077 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-357
Cow position: chrX:5324349-5324006 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-358
Cow position: chrX:8586454-8586812 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:7029549-7029908 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 15-359
Cow position: chrX:7092967-7093318 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-359
Cow position: chrX:12289575-12289222 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:12341555-12341912 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 23

Conread position: 15-359
Cow position: chrX:37848372-37848733 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 15-364
Cow position: chrX:2101227-2101583 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chrX:3422080-3421716 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 15-364
Cow position: chrX:16275051-16275401 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 15-364
Cow position: chrX:20316694-20316332 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 15-364
Cow position: chrX:31187874-31187511 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 16-168
Cow position: chrX:28553385-28553535 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 16-273
Cow position: chrX:29284096-29284365 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 261

Conread position: 16-357
Cow position: chrX:19927674-19928035 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 23

Conread position: 16-364
Cow position: chrX:25332462-25332813 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 23

Conread position: 17-364
Cow position: chrX:26767829-26767473 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 18-362
Cow position: chrX:24137032-24136672 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chrX:21290122-21289767 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-364
Cow position: chrX:40057696-40057340 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 22

Conread position: 20-279
Cow position: chrX:12672177-12671908 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 18

Conread position: 20-291
Cow position: chrX:31192395-31192124 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 18

Conread position: 21-353
Cow position: chrX:28651747-28651415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 21-364
Cow position: chrX:22813771-22814109 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 18

Conread position: 21-364
Cow position: chrX:30143020-30142664 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 23-336
Cow position: chrX:21586404-21586729 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 24-316
Cow position: chrX:5337204-5336896 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 33

Conread position: 25-221
Cow position: chrX:6577067-6577270 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 13

Conread position: 25-238
Cow position: chrX:12704543-12704320 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 25-295
Cow position: chrX:3376853-3376571 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 159

Conread position: 25-304
Cow position: chrX:29174227-29173939 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 13

Conread position: 25-307
Cow position: chrX:22610680-22610973 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 13

Conread position: 25-316
Cow position: chrX:9172994-9172692 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 13

Conread position: 25-325
Cow position: chrX:28506568-28506256 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 102, 13

Conread position: 25-329
Cow position: chrX:20360561-20360245 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-357
Cow position: chrX:5284356-5284017 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:8669963-8670312 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:9007713-9008061 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-359
Cow position: chrX:9193272-9192925 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 25-359
Cow position: chrX:24380677-24381030 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 13

Conread position: 25-359
Cow position: chrX:28759250-28758908 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:2860430-2860077 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:5395593-5395239 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:5862767-5863122 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 25-364
Cow position: chrX:11465628-11465277 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 13

Conread position: 25-364
Cow position: chrX:12655377-12655031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-364
Cow position: chrX:17479153-17478800 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 26-308
Cow position: chrX:234616-234899 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 12

Conread position: 28-359
Cow position: chrX:7751276-7751618 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 28-364
Cow position: chrX:30046742-30046393 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 29-364
Cow position: chrX:24275044-24275397 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 29-364
Cow position: chrX:29951191-29950850 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 112, 9

Conread position: 29-364
Cow position: chrX:35017199-35017538 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 30-359
Cow position: chrX:6873701-6873351 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 28

Conread position: 30-359
Cow position: chrX:30666567-30666219 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 30-364
Cow position: chrX:13007260-13006909 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 30-364
Cow position: chrX:21602261-21602612 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 30-364
Cow position: chrX:22777690-22778036 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 30-364
Cow position: chrX:39717174-39717522 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 31-330
Cow position: chrX:26628939-26628633 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chrX:20803515-20803850 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 31-364
Cow position: chrX:24122542-24122193 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 32-364
Cow position: chrX:4795300-4795642 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 34-364
Cow position: chrX:17668908-17668562 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 38-307
Cow position: chrX:25187041-25187324 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 38-329
Cow position: chrX:28522316-28522011 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 236

Conread position: 38-364
Cow position: chrX:2603430-2603773 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 38-364
Cow position: chrX:8454140-8454476 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 18

Conread position: 38-364
Cow position: chrX:13077308-13076970 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:13097882-13097544 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:13398733-13398392 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 245

Conread position: 38-364
Cow position: chrX:15127862-15127517 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position: chrX:18218783-18219121 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 38-364
Cow position: chrX:22487570-22487913 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 38-364
Cow position: chrX:27990395-27990055 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 193

Conread position: 40-315
Cow position: chrX:11534870-11535153 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 266

Conread position: 40-364
Cow position: chrX:12804468-12804138 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 40-364
Cow position: chrX:21828911-21829248 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 41-364
Cow position: chrX:5834774-5834446 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 45-202
Cow position: chrX:9124785-9124944 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 45-331
Cow position: chrX:12182589-12182888 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 12

Conread position: 46-358
Cow position: chrX:15180043-15179711 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 203

Conread position: 49-364
Cow position: chrX:23046540-23046870 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 277

Conread position: 56-364
Cow position: chrX:21633181-21632859 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 60-358
Cow position: chrX:29092908-29093223 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 62-364
Cow position: chrX:12478132-12478444 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 20

Conread position: 63-364
Cow position: chrX:14787460-14787148 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 67-364
Cow position: chrX:6909923-6909612 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 69-364
Cow position: chrX:1833252-1833552 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 171

Conread position: 72-364
Cow position: chrX:23018748-23019048 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 34

Conread position: 106-364
Cow position: chrX:27494155-27494432 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 114-364
Cow position: chrX:6276123-6275869 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 136-308
Cow position: chrX:28604311-28604136 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 11

Conread position: 137-364
Cow position: chrX:26504684-26504913 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 66

Conread position: 141-331
Cow position: chrX:29873065-29872871 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 143-293
Cow position: chrX:982163-982317 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 144-275
Cow position: chrX:24276010-24275873 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 9

Conread position: 155-363
Cow position: chrX:12998052-12997840 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 159-315
Cow position: chrX:28553587-28553744 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 175-359
Cow position: chrX:28562682-28562494 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 175-364
Cow position: chrX:21794628-21794822 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 185

Conread position: 230-364
Cow position: chrX:29285021-29285158 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 14

Conread position: 231-364
Cow position: chrX:16935968-16935833 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 240-364
Cow position: chrX:2537174-2537047 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.