Cow genome map

Conread name: rsag05_b2.y1

Conread position: 1-200
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 159, 47

Conread position: 1-332
Cow position:
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 1-333
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 57

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 122

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 274, 122

Conread position: 1-334
Cow position:
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 1-334
Cow position:
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 2-209
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 125, 30

Conread position: 2-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 121

Conread position: 2-334
Cow position:
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 2-334
Cow position:
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 121

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 120

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-282
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 3-328
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 120

Conread position: 3-332
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-332
Cow position:
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-333
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 125

Conread position: 3-333
Cow position:
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 121

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 70

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 44

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 34

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 93

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 113

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 229, 13

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 127

Conread position: 3-334
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 125

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 197, 33

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 122

Conread position: 3-334
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 133

Conread position: 3-334
Cow position:
Alignm length: 344
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 40

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 44

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 120

Conread position: 4-227
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 119

Conread position: 4-334
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 33

Conread position: 5-209
Cow position:
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 115

Conread position: 5-331
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 120

Conread position: 5-334
Cow position:
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 67

Conread position: 5-334
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 118

Conread position: 7-334
Cow position:
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 7-334
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 116

Conread position: 8-334
Cow position:
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 115

Conread position: 25-209
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 138, 98

Conread position: 25-331
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 138, 98

Conread position: 25-334
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 15

Conread position: 25-334
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 18

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 254, 18

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 26-334
Cow position:
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 27-333
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 136, 81

Conread position: 27-334
Cow position:
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 30-332
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 93

Conread position: 34-334
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 135, 91

Conread position: 42-334
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 81

Conread position: 45-334
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 117, 30

Conread position: 45-334
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 47-334
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 237, 76

Conread position: 52-209
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 111, 71

Conread position: 56-334
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 218, 80

Conread position: 56-334
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 72

Conread position: 57-334
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 165, 5

Conread position: 59-334
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 64

Conread position: 63-334
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 64-334
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 7, 55

Conread position: 77-334
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 200, 46

Conread position: 88-334
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 35

Conread position: 92-334
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 182, 31

Conread position: 92-334
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 182, 11

Conread position: 102-334
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 172, 21

Conread position: 121-334
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 153, 39

Conread position: 189-334
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 14

Conread position: 205-334
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 205-334
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 99

Conread position: 205-334
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 205-334
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 206-334
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 208-334
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 209-334
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 10

Show alignments to all cow chromosomes.