Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               1-161
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               136
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               162, 122
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 123
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               162, 122
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 121
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 58
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 106
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 157
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               268, 23
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 119
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 127
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               5-193
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               155, 118
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               156, 116
               

               Conread position:
               10-209
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               10-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 113
               

               Conread position:
               16-209
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               147, 36
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 63
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               30-334
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 94
               

               Conread position:
               33-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 90
               

               Conread position:
               45-334
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 78
               

               Conread position:
               46-331
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               112, 79
               

               Conread position:
               56-334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               218, 67
               

               Conread position:
               80-334
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               194, 50
               

               Conread position:
               203-334
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               206-334
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               209-334
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 48
               
Show alignments to all cow chromosomes.