Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               273, 18
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               276, 112
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 122
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 41
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               3-194
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               160, 66
               

               Conread position:
               3-195
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               160, 88
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               133, 97
               

               Conread position:
               3-278
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               147, 196
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               145, 59
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 166
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 157
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 107
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 118
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 97
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               162, 41
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               157, 94
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               205, 122
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 64
               

               Conread position:
               4-209
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 119
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 119
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               43, 112
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               156, 121
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 36
               

               Conread position:
               8-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 115
               

               Conread position:
               17-334
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 106
               

               Conread position:
               25-209
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               152
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               136, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 98
               

               Conread position:
               33-209
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               35-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               128, 88
               

               Conread position:
               43-334
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               120, 85
               

               Conread position:
               60-332
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               83-333
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               191, 40
               

               Conread position:
               113-332
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               171, 15
               

               Conread position:
               166-334
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               170-334
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               37, 140
               

               Conread position:
               205-334
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.