Cow genome map
| Conread name: | rsag05_b2.y1 |
| Conread position: | 1-200 |
| Cow position: | chr12:35346017-35346224 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 158, 122 |
| Conread position: | 1-333 |
| Cow position: | chr12:48471400-48471081 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-209 |
| Cow position: | chr12:14660861-14660647 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-209 |
| Cow position: | chr12:43913327-43913541 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-328 |
| Cow position: | chr12:21092238-21091916 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 125 |
| Conread position: | 3-330 |
| Cow position: | chr12:27854476-27854151 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:6405147-6404821 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 40 |
| Conread position: | 3-334 |
| Cow position: | chr12:8676601-8676272 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:11099715-11100052 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 118 |
| Conread position: | 3-334 |
| Cow position: | chr12:20461741-20461415 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:20996597-20996283 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-334 |
| Cow position: | chr12:21429497-21429826 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:22204223-22203894 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:24994474-24994145 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:27931420-27931090 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 120 |
| Conread position: | 3-334 |
| Cow position: | chr12:32655041-32655368 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 11 |
| Conread position: | 3-334 |
| Cow position: | chr12:37560502-37560821 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 120 |
| Conread position: | 7-201 |
| Cow position: | chr12:33042853-33043056 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 151, 116 |
| Conread position: | 14-334 |
| Cow position: | chr12:15950307-15949990 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 114 |
| Conread position: | 19-205 |
| Cow position: | chr12:21482606-21482799 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 25-332 |
| Cow position: | chr12:42858024-42857719 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 26-334 |
| Cow position: | chr12:17967327-17967624 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 69-334 |
| Cow position: | chr12:21428038-21427775 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 205-334 |
| Cow position: | chr12:25267731-25267594 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.