Cow genome map
| Conread name: | rsag05_b2.y1 |
| Conread position: | 2-334 |
| Cow position: | chr18:16175039-16174710 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 121 |
| Conread position: | 2-334 |
| Cow position: | chr18:51482437-51482765 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 161, 41 |
| Conread position: | 3-200 |
| Cow position: | chr18:33752280-33752483 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 150, 120 |
| Conread position: | 3-207 |
| Cow position: | chr18:51695284-51695497 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 160, 127 |
| Conread position: | 3-209 |
| Cow position: | chr18:28972304-28972090 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-333 |
| Cow position: | chr18:14417549-14417879 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-333 |
| Cow position: | chr18:24617715-24618043 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 120 |
| Conread position: | 3-334 |
| Cow position: | chr18:5534592-5534917 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 3-334 |
| Cow position: | chr18:14131973-14132301 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 95 |
| Conread position: | 3-334 |
| Cow position: | chr18:19353949-19354278 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr18:23799231-23799555 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 93 |
| Conread position: | 3-334 |
| Cow position: | chr18:25921973-25922302 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr18:33270490-33270811 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 103 |
| Conread position: | 3-334 |
| Cow position: | chr18:36510199-36510528 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 120 |
| Conread position: | 3-334 |
| Cow position: | chr18:47743089-47743402 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 5-334 |
| Cow position: | chr18:29238476-29238796 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 7-334 |
| Cow position: | chr18:37507549-37507874 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 8-332 |
| Cow position: | chr18:51343270-51343592 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 115 |
| Conread position: | 23-334 |
| Cow position: | chr18:11273255-11272947 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 100 |
| Conread position: | 25-209 |
| Cow position: | chr18:16089724-16089916 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 138, 103 |
| Conread position: | 25-334 |
| Cow position: | chr18:29865006-29864700 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 98 |
| Conread position: | 25-334 |
| Cow position: | chr18:40482601-40482907 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 98 |
| Conread position: | 26-334 |
| Cow position: | chr18:27988791-27989097 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 97 |
| Conread position: | 31-209 |
| Cow position: | chr18:32166313-32166127 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 92 |
| Conread position: | 59-334 |
| Cow position: | chr18:52654453-52654723 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 78-334 |
| Cow position: | chr18:23660844-23660590 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 196, 45 |
| Conread position: | 78-334 |
| Cow position: | chr18:54106755-54107016 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 197, 45 |
| Conread position: | 93-334 |
| Cow position: | chr18:54169851-54169612 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 181, 30 |
| Conread position: | 205-334 |
| Cow position: | chr18:37584133-37583996 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.