Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 47
               

               Conread position:
               3-101
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               151, 125
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               102, 129
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               85, 126
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 120
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               155, 40
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 120
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               271, 40
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 61
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 36
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 37
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 123
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 125
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 161
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 22
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               271, 79
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 40
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 122
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 89
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 159
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 77
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 121
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 53
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 40
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               4-161
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               134
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-278
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               153, 119
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 119
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 35
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               5-209
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 118
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               134, 227
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 36
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 36
               

               Conread position:
               8-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 115
               

               Conread position:
               12-334
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               19-334
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 104
               

               Conread position:
               23-331
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 7
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 92
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               80, 105
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 33
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 98
               

               Conread position:
               30-334
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 93
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               86, 145
               

               Conread position:
               40-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               120, 75
               

               Conread position:
               45-334
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 78
               

               Conread position:
               46-209
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               59-334
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               104, 64
               

               Conread position:
               76-334
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               198, 47
               

               Conread position:
               93-334
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               181, 30
               

               Conread position:
               106-334
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               136-334
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               139, 39
               

               Conread position:
               205-334
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               207-334
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               213-334
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.