Cow genome map
| Conread name: | rsag05_b2.y1 |
| Conread position: | 1-278 |
| Cow position: | chr20:12041970-12042234 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-334 |
| Cow position: | chr20:25899234-25899565 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 122 |
| Conread position: | 2-334 |
| Cow position: | chr20:23468119-23467791 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 49 |
| Conread position: | 3-209 |
| Cow position: | chr20:21717974-21718196 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 3-316 |
| Cow position: | chr20:5536492-5536803 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-333 |
| Cow position: | chr20:23800432-23800761 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 3-334 |
| Cow position: | chr20:824315-824644 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:8972629-8972294 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 3-334 |
| Cow position: | chr20:9547195-9547523 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 92 |
| Conread position: | 3-334 |
| Cow position: | chr20:10101469-10101145 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 3-334 |
| Cow position: | chr20:12436872-12436523 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:15096346-15096016 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 3-334 |
| Cow position: | chr20:19439464-19439793 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:20441403-20441074 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:21916185-21916514 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:25849281-25848956 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:26054142-26053814 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:28162373-28162702 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:28564032-28563699 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr20:30429819-30430147 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 3-334 |
| Cow position: | chr20:35126209-35126533 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 19 |
| Conread position: | 4-209 |
| Cow position: | chr20:29950074-29950287 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 159, 119 |
| Conread position: | 7-334 |
| Cow position: | chr20:17660193-17659866 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 116 |
| Conread position: | 8-334 |
| Cow position: | chr20:19341380-19341702 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 108 |
| Conread position: | 10-333 |
| Cow position: | chr20:13787593-13787914 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 20-209 |
| Cow position: | chr20:19214544-19214741 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 140, 103 |
| Conread position: | 25-334 |
| Cow position: | chr20:13764465-13764773 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 60-334 |
| Cow position: | chr20:16178143-16177872 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 171-330 |
| Cow position: | chr20:14868665-14868496 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.