Cow genome map

Conread name: rsag05_b2.y1

Conread position: 3-209
Cow position: chr23:23172263-23172475 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 157, 40

Conread position: 3-333
Cow position: chr23:22145821-22145493 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:965010-964689 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:1957655-1957974 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:2025595-2025267 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 99

Conread position: 3-334
Cow position: chr23:2759383-2759712 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:3879601-3879272 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:4435137-4435467 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 121

Conread position: 3-334
Cow position: chr23:4639107-4638784 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 98

Conread position: 3-334
Cow position: chr23:5873087-5872758 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 120

Conread position: 3-334
Cow position: chr23:7314395-7314724 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position: chr23:11714381-11714052 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position: chr23:14961467-14961138 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 122

Conread position: 3-334
Cow position: chr23:15218403-15218074 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 160, 125

Conread position: 3-334
Cow position: chr23:15527062-15527394 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 120

Conread position: 3-334
Cow position: chr23:20154742-20154414 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position: chr23:28218910-28219248 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 127

Conread position: 3-334
Cow position: chr23:28304400-28304729 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:31164287-31164615 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 3-334
Cow position: chr23:32351277-32350948 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position: chr23:41141742-41141413 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 5-334
Cow position: chr23:14972469-14972141 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 118

Conread position: 12-334
Cow position: chr23:1400711-1400395 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 37

Conread position: 18-334
Cow position: chr23:3707901-3708216 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 25-334
Cow position: chr23:36029873-36029569 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 98

Conread position: 27-334
Cow position: chr23:19491060-19491364 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 96

Conread position: 43-334
Cow position: chr23:29478737-29479017 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 85

Conread position: 134-334
Cow position: chr23:1340187-1339988 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 29

Conread position: 206-334
Cow position: chr23:38579349-38579485 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.