Cow genome map
| Conread name: | rsag05_b2.y1 |
| Conread position: | 2-334 |
| Cow position: | chr24:19834980-19835307 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 121 |
| Conread position: | 3-193 |
| Cow position: | chr24:8606391-8606593 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 3-209 |
| Cow position: | chr24:4413972-4413767 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 3-209 |
| Cow position: | chr24:6036563-6036777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-209 |
| Cow position: | chr24:44019083-44019297 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-277 |
| Cow position: | chr24:6353712-6353973 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 3-331 |
| Cow position: | chr24:13044053-13043727 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-332 |
| Cow position: | chr24:12087774-12088101 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 115 |
| Conread position: | 3-333 |
| Cow position: | chr24:16560739-16560407 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 3-334 |
| Cow position: | chr24:147037-146706 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr24:6963176-6962847 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 117 |
| Conread position: | 3-334 |
| Cow position: | chr24:9090477-9090157 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 19 |
| Conread position: | 3-334 |
| Cow position: | chr24:13189747-13190067 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 270, 77 |
| Conread position: | 3-334 |
| Cow position: | chr24:13233833-13234151 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 271, 53 |
| Conread position: | 3-334 |
| Cow position: | chr24:14755573-14755902 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 125 |
| Conread position: | 3-334 |
| Cow position: | chr24:20286338-20286009 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 125 |
| Conread position: | 3-334 |
| Cow position: | chr24:23504285-23503956 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-334 |
| Cow position: | chr24:29188861-29189190 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr24:38585560-38585232 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 8-334 |
| Cow position: | chr24:7063122-7063443 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 47 |
| Conread position: | 10-334 |
| Cow position: | chr24:22972646-22972968 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 113 |
| Conread position: | 11-331 |
| Cow position: | chr24:33934970-33935288 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 105 |
| Conread position: | 12-334 |
| Cow position: | chr24:13179436-13179120 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 80 |
| Conread position: | 12-334 |
| Cow position: | chr24:19703071-19703390 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 19-333 |
| Cow position: | chr24:19469017-19468706 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 37-333 |
| Cow position: | chr24:35868976-35868687 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 237, 91 |
| Conread position: | 40-334 |
| Cow position: | chr24:40468781-40469077 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 41-208 |
| Cow position: | chr24:12163844-12164019 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 43-209 |
| Cow position: | chr24:6323736-6323562 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 80 |
| Conread position: | 44-334 |
| Cow position: | chr24:23094409-23094123 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 45-334 |
| Cow position: | chr24:36557945-36557667 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 70 |
| Conread position: | 62-333 |
| Cow position: | chr24:12107932-12107663 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 151, 61 |
| Conread position: | 100-334 |
| Cow position: | chr24:209337-209106 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 104-334 |
| Cow position: | chr24:16082825-16082597 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 170, 19 |
| Conread position: | 173-334 |
| Cow position: | chr24:5991432-5991260 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 205-334 |
| Cow position: | chr24:11151358-11151223 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 206-334 |
| Cow position: | chr24:6411245-6411381 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.