Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               119, 147
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               185, 42
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 123
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 122
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 122
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 76
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 123
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               157, 83
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               112, 122
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               163, 120
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               270, 17
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 84
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               143, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 114
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 21
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 19
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               161, 120
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 168
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               159, 119
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 116
               

               Conread position:
               12-333
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 14
               

               Conread position:
               17-334
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 106
               

               Conread position:
               23-282
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               26-334
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 94
               

               Conread position:
               27-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               42-334
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               135, 73
               

               Conread position:
               62-206
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               80-210
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-334
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               180, 29
               

               Conread position:
               134-333
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 26
               

               Conread position:
               149-334
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               170-334
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               205-334
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               205-334
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               207-334
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 0
               
Show alignments to all cow chromosomes.