Cow genome map
Conread name: | rsag05_b2.y1 |
Conread position: | 1-209 |
Cow position: | chr28:25761001-25761212 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 119, 147 |
Conread position: | 1-333 |
Cow position: | chr28:10471190-10471514 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 242 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 185, 42 |
Conread position: | 1-334 |
Cow position: | chr28:1166362-1166031 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 123 |
Conread position: | 1-334 |
Cow position: | chr28:7059136-7058805 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 122 |
Conread position: | 1-334 |
Cow position: | chr28:21361025-21361355 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 122 |
Conread position: | 1-334 |
Cow position: | chr28:22231756-22231429 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 76 |
Conread position: | 1-334 |
Cow position: | chr28:26424730-26424398 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 123 |
Conread position: | 3-208 |
Cow position: | chr28:15685003-15685213 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 127, 37 |
Conread position: | 3-209 |
Cow position: | chr28:5766266-5766479 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 157, 83 |
Conread position: | 3-209 |
Cow position: | chr28:10580340-10580124 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 166 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 112, 122 |
Conread position: | 3-209 |
Cow position: | chr28:13461505-13461716 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 163, 120 |
Conread position: | 3-275 |
Cow position: | chr28:23023763-23024016 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 204 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 270, 17 |
Conread position: | 3-311 |
Cow position: | chr28:29821525-29821828 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 239 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 160, 40 |
Conread position: | 3-330 |
Cow position: | chr28:24669132-24669456 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 84 |
Conread position: | 3-332 |
Cow position: | chr28:32790858-32790538 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 230 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 157, 13 |
Conread position: | 3-334 |
Cow position: | chr28:484060-483731 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 242 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 153, 120 |
Conread position: | 3-334 |
Cow position: | chr28:784191-784520 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 160, 120 |
Conread position: | 3-334 |
Cow position: | chr28:1216301-1215976 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 252 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 143, 120 |
Conread position: | 3-334 |
Cow position: | chr28:1459629-1459958 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 120 |
Conread position: | 3-334 |
Cow position: | chr28:1506400-1506729 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:1813399-1813077 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 114 |
Conread position: | 3-334 |
Cow position: | chr28:1954889-1955218 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:3190718-3190389 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:5939022-5939350 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 237 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 160, 120 |
Conread position: | 3-334 |
Cow position: | chr28:6537276-6536940 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:6778407-6778078 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:7827519-7827841 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 21 |
Conread position: | 3-334 |
Cow position: | chr28:8380571-8380899 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:9288484-9288810 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 19 |
Conread position: | 3-334 |
Cow position: | chr28:15034577-15034248 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 120 |
Conread position: | 3-334 |
Cow position: | chr28:17389935-17390266 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:18518913-18518584 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:22259620-22259294 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:24590391-24590719 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:33638078-33638401 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 120 |
Conread position: | 3-334 |
Cow position: | chr28:34595766-34596094 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 161, 120 |
Conread position: | 4-334 |
Cow position: | chr28:11504706-11504378 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 168 |
Conread position: | 4-334 |
Cow position: | chr28:14703848-14703521 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 245 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 159, 119 |
Conread position: | 7-209 |
Cow position: | chr28:7741970-7742181 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 66, 117 |
Conread position: | 7-334 |
Cow position: | chr28:7003534-7003863 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 116 |
Conread position: | 12-333 |
Cow position: | chr28:10495956-10495639 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 242 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 148, 14 |
Conread position: | 17-334 |
Cow position: | chr28:31591107-31591422 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 257, 106 |
Conread position: | 23-282 |
Cow position: | chr28:13721568-13721824 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 180 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 26-334 |
Cow position: | chr28:2086022-2086328 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 248, 94 |
Conread position: | 27-334 |
Cow position: | chr28:1772947-1773247 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 18, 33 |
Conread position: | 42-334 |
Cow position: | chr28:10067489-10067198 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 136 |
Conread position: | 57-334 |
Cow position: | chr28:24884442-24884708 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 135, 73 |
Conread position: | 62-206 |
Cow position: | chr28:2117587-2117739 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 124 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 98, 61 |
Conread position: | 80-210 |
Cow position: | chr28:7828204-7828333 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 94-334 |
Cow position: | chr28:15998728-15998966 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 180 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 180, 29 |
Conread position: | 134-333 |
Cow position: | chr28:5567815-5568013 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 149-334 |
Cow position: | chr28:3019040-3018844 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 149 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 9, 61 |
Conread position: | 170-334 |
Cow position: | chr28:33253987-33254166 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 205-334 |
Cow position: | chr28:9180602-9180738 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 205-334 |
Cow position: | chr28:17630825-17630962 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 207-334 |
Cow position: | chr28:17665599-17665464 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.