Cow genome map
| Conread name: | rsag05_b2.y1 |
| Conread position: | 1-209 |
| Cow position: | chr29:27812587-27812795 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 2-209 |
| Cow position: | chr29:43325016-43325228 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 2-332 |
| Cow position: | chr29:19655117-19655443 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 121 |
| Conread position: | 2-334 |
| Cow position: | chr29:2101336-2101665 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 121 |
| Conread position: | 2-334 |
| Cow position: | chr29:21431355-21431028 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 121 |
| Conread position: | 3-209 |
| Cow position: | chr29:13583579-13583793 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 157, 127 |
| Conread position: | 3-278 |
| Cow position: | chr29:5959073-5959337 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-331 |
| Cow position: | chr29:13018196-13018514 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 44 |
| Conread position: | 3-333 |
| Cow position: | chr29:16024061-16024389 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-333 |
| Cow position: | chr29:45624890-45625216 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 271, 74 |
| Conread position: | 3-334 |
| Cow position: | chr29:46962-46635 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 160, 74 |
| Conread position: | 3-334 |
| Cow position: | chr29:609150-608821 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:2691661-2691989 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 160, 32 |
| Conread position: | 3-334 |
| Cow position: | chr29:2839844-2839514 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 38 |
| Conread position: | 3-334 |
| Cow position: | chr29:5236519-5236851 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 3-334 |
| Cow position: | chr29:7429628-7429293 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 3-334 |
| Cow position: | chr29:7845888-7846217 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:9641287-9640957 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:10022834-10022505 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:13622360-13622031 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:14210054-14209725 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 125 |
| Conread position: | 3-334 |
| Cow position: | chr29:16345710-16346027 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-334 |
| Cow position: | chr29:19526788-19526459 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:19621781-19621440 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 3-334 |
| Cow position: | chr29:25931023-25930692 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:26163335-26163009 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:27180255-27179926 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:32287747-32288073 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 61 |
| Conread position: | 3-334 |
| Cow position: | chr29:32541592-32541922 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:35298408-35298737 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:38207166-38206837 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 122 |
| Conread position: | 3-334 |
| Cow position: | chr29:39078213-39077885 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 160, 120 |
| Conread position: | 3-334 |
| Cow position: | chr29:45206021-45206357 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 7-334 |
| Cow position: | chr29:2465374-2465049 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 121 |
| Conread position: | 7-334 |
| Cow position: | chr29:34798309-34797984 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 116 |
| Conread position: | 13-266 |
| Cow position: | chr29:2746954-2746692 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 110 |
| Conread position: | 17-334 |
| Cow position: | chr29:13851359-13851051 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 106 |
| Conread position: | 25-329 |
| Cow position: | chr29:38228498-38228799 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 98 |
| Conread position: | 25-334 |
| Cow position: | chr29:6264480-6264172 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 98 |
| Conread position: | 25-334 |
| Cow position: | chr29:8625688-8625368 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 112 |
| Conread position: | 25-334 |
| Cow position: | chr29:14587439-14587751 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 98 |
| Conread position: | 37-330 |
| Cow position: | chr29:9082350-9082063 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 16 |
| Conread position: | 39-334 |
| Cow position: | chr29:15625187-15624898 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 236, 66 |
| Conread position: | 45-334 |
| Cow position: | chr29:409719-409435 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 78 |
| Conread position: | 49-334 |
| Cow position: | chr29:17406670-17406951 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 235, 9 |
| Conread position: | 52-334 |
| Cow position: | chr29:10645863-10645584 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 71 |
| Conread position: | 74-334 |
| Cow position: | chr29:21422126-21421871 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 207, 49 |
Show alignments to all cow chromosomes.