Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               131, 6
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               145, 122
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 125
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 28
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 114
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 21
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 121
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 121
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               181, 120
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 117
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 59
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 32
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               41, 126
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 44
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 38
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               75, 115
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 119
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               4-209
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               159, 119
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 119
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 62
               

               Conread position:
               5-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               155, 118
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 124
               

               Conread position:
               5-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 118
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 116
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 75
               

               Conread position:
               8-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               155, 8
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 114
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               17-334
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 106
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               26-334
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 97
               

               Conread position:
               26-334
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               246, 97
               

               Conread position:
               34-209
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               129, 7
               

               Conread position:
               41-334
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 7
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               60-331
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               188, 65
               

               Conread position:
               64-334
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               90-334
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               184, 33
               

               Conread position:
               123-334
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               187-334
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               206-334
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 109
               
Show alignments to all cow chromosomes.