Cow genome map

Conread name: rsag05_b2.y1

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 1-209
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 159, 122

Conread position: 1-209
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 122

Conread position: 1-209
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 157, 39

Conread position: 1-331
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 274, 25

Conread position: 1-334
Cow position:
Alignm length: 343
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 122

Conread position: 1-334
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 123

Conread position: 1-334
Cow position:
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 127

Conread position: 2-274
Cow position:
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 121

Conread position: 2-332
Cow position:
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 50

Conread position: 2-334
Cow position:
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 93

Conread position: 2-334
Cow position:
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 2-334
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 74

Conread position: 3-209
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 30

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 157, 120

Conread position: 3-210
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 63, 42

Conread position: 3-214
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 123

Conread position: 3-222
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 39

Conread position: 3-330
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-331
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 105

Conread position: 3-333
Cow position:
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 120

Conread position: 3-333
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 275, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 160, 120

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 121

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 79

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 120

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 19

Conread position: 3-334
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 110

Conread position: 3-334
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 75

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 118

Conread position: 3-334
Cow position:
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 115

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 120

Conread position: 3-334
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 160, 125

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 121

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 157, 33

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 126

Conread position: 4-334
Cow position:
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 119

Conread position: 5-333
Cow position:
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 118

Conread position: 5-334
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 122

Conread position: 7-334
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 126

Conread position: 25-209
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 98

Conread position: 25-333
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 19

Conread position: 25-334
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 98

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 249, 27

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 96

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 39-334
Cow position:
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 235, 84

Conread position: 45-170
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 79

Conread position: 45-334
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 78

Conread position: 52-209
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 5

Conread position: 56-334
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 69

Conread position: 56-334
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 48

Conread position: 57-332
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 66

Conread position: 70-334
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 204, 58

Conread position: 88-334
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 186, 35

Conread position: 92-333
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 182, 31

Conread position: 92-334
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 31

Conread position: 105-334
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 67

Conread position: 205-334
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 211-334
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 117

Show alignments to all cow chromosomes.