Cow genome map

Conread name: rsag05_b2.y1

Conread position: 1-209
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 77

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 1-279
Cow position:
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 125

Conread position: 1-334
Cow position:
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 122

Conread position: 2-334
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 47

Conread position: 2-334
Cow position:
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 90

Conread position: 2-334
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 121

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 162, 120

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 29

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 120

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 120

Conread position: 3-209
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 32

Conread position: 3-278
Cow position:
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 120

Conread position: 3-325
Cow position:
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 28

Conread position: 3-331
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 160, 44

Conread position: 3-333
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 100

Conread position: 3-333
Cow position:
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-333
Cow position:
Alignm length: 351
Alignm identity: 252
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 18

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 121

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position:
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 47

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 270, 34

Conread position: 3-334
Cow position:
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 117

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 157, 49

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 243
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 124, 148

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 201

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 122

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 120

Conread position: 3-334
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 96

Conread position: 3-334
Cow position:
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 356
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 136

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 3-334
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 120

Conread position: 3-334
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 120

Conread position: 7-334
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 36

Conread position: 7-334
Cow position:
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 121

Conread position: 10-334
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 213, 113

Conread position: 11-334
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 264, 112

Conread position: 14-334
Cow position:
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 52

Conread position: 15-334
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 19-334
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 70

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 98

Conread position: 25-334
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 249, 54

Conread position: 27-334
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 247, 25

Conread position: 30-334
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 130, 93

Conread position: 33-334
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 90

Conread position: 47-334
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 234, 76

Conread position: 63-334
Cow position:
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 69-334
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 205, 46

Conread position: 69-334
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 42

Conread position: 114-334
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 9

Conread position: 136-334
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 33

Conread position: 162-334
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 20

Conread position: 170-334
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 17

Conread position: 205-334
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 206-330
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 207-334
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.