Cow genome map


           Conread name:
           rsag05_b2.y1
        

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 128
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 122
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               160, 105
               

               Conread position:
               3-199
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               160, 70
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               147, 28
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 32
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 120
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 122
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 77
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 40
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 45
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 182
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               272, 63
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               271, 53
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 119
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 92
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 40
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 44
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 100
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 120
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 58
               

               Conread position:
               4-333
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 119
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               8-334
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 115
               

               Conread position:
               10-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 27
               

               Conread position:
               20-334
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               100, 86
               

               Conread position:
               25-195
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               25-332
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 98
               

               Conread position:
               25-334
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               136, 98
               

               Conread position:
               36-334
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 87
               

               Conread position:
               42-334
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               233, 81
               

               Conread position:
               44-334
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 80
               

               Conread position:
               48-334
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               112, 75
               

               Conread position:
               53-334
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 70
               

               Conread position:
               56-209
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               60-331
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               60-333
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               71-334
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               203, 52
               

               Conread position:
               82-334
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               192, 41
               

               Conread position:
               114-334
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               115-329
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               159, 8
               

               Conread position:
               128-334
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               146, 32
               

               Conread position:
               203-334
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               206-334
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               209-334
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 64
               
Show alignments to all cow chromosomes.