Cow genome map


           Conread name:
           rsag15_d6.y1
        

               Conread position:
               1-445
               

               Cow position:
               chr5:47052703-47052271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               3-439
               

               Cow position:
               chr5:53952860-53953303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 7
               

               Conread position:
               8-400
               

               Cow position:
               chr5:55421064-55420676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               152, 24
               

               Conread position:
               177-373
               

               Cow position:
               chr5:72454630-72454431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               129, 76
               

               Conread position:
               187-445
               

               Cow position:
               chr5:12578700-12578435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               195-445
               

               Cow position:
               chr5:38636867-38637126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               198-445
               

               Cow position:
               chr5:53687596-53687349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               205-443
               

               Cow position:
               chr5:37821779-37822034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 53
               
Show alignments to all cow chromosomes.