Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-276 |
| Cow position: | chr10:32008730-32008451 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-305 |
| Cow position: | chr10:2243609-2243304 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 45 |
| Conread position: | 1-308 |
| Cow position: | chr10:16928810-16928502 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 101 |
| Conread position: | 1-309 |
| Cow position: | chr10:14333189-14333507 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-309 |
| Cow position: | chr10:38342709-38343032 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-309 |
| Cow position: | chr10:47909271-47908960 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 49 |
| Conread position: | 1-310 |
| Cow position: | chr10:21896999-21897310 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 32 |
| Conread position: | 1-310 |
| Cow position: | chr10:24294643-24294942 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 62 |
| Conread position: | 1-311 |
| Cow position: | chr10:4996684-4996992 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 1-311 |
| Cow position: | chr10:10584782-10584468 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 173 |
| Conread position: | 1-311 |
| Cow position: | chr10:19842323-19842022 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:21426647-21426966 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:30682836-30683147 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 277 |
| Conread position: | 1-311 |
| Cow position: | chr10:32280502-32280182 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:32364595-32364276 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:32703418-32703098 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:39776351-39776662 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 246 |
| Conread position: | 1-311 |
| Cow position: | chr10:40642587-40642276 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 1-311 |
| Cow position: | chr10:48374791-48375111 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:51558052-51557732 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr10:68096962-68097280 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 34 |
| Conread position: | 1-312 |
| Cow position: | chr10:6287398-6287081 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 1-312 |
| Cow position: | chr10:29844025-29844336 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 2-296 |
| Cow position: | chr10:53339865-53339570 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 2-309 |
| Cow position: | chr10:8292781-8292468 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 240 |
| Conread position: | 2-311 |
| Cow position: | chr10:1380153-1379836 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr10:2118372-2118691 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-311 |
| Cow position: | chr10:7279447-7279762 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 244 |
| Conread position: | 2-311 |
| Cow position: | chr10:12101740-12102049 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 131 |
| Conread position: | 2-311 |
| Cow position: | chr10:14855267-14854958 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 113 |
| Conread position: | 2-311 |
| Cow position: | chr10:17958735-17958417 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 33 |
| Conread position: | 2-311 |
| Cow position: | chr10:37772544-37772228 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr10:38842818-38842499 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr10:40149511-40149814 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 56 |
| Conread position: | 2-311 |
| Cow position: | chr10:48170177-48169867 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 2-379 |
| Cow position: | chr10:6254808-6255178 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 124 |
| Conread position: | 2-384 |
| Cow position: | chr10:19513883-19513477 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 3-311 |
| Cow position: | chr10:15620732-15621048 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 30 |
| Conread position: | 3-311 |
| Cow position: | chr10:22618761-22619072 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 127 |
| Conread position: | 3-311 |
| Cow position: | chr10:26292835-26293153 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 3-311 |
| Cow position: | chr10:29629619-29629924 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 4-310 |
| Cow position: | chr10:21516360-21516673 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 139 |
| Conread position: | 4-311 |
| Cow position: | chr10:38543270-38543575 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 65 |
| Conread position: | 6-309 |
| Cow position: | chr10:38723923-38723612 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 13-311 |
| Cow position: | chr10:7895841-7896146 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:22344119-22343805 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:23848606-23848298 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:31856123-31855815 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:39210400-39210096 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 37 |
| Conread position: | 13-311 |
| Cow position: | chr10:39813751-39814059 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:46762842-46762544 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 124 |
| Conread position: | 13-311 |
| Cow position: | chr10:53172677-53172985 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr10:57554695-57555003 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 13-312 |
| Cow position: | chr10:51950456-51950762 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 13-384 |
| Cow position: | chr10:25340793-25340400 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 21 |
| Conread position: | 14-308 |
| Cow position: | chr10:28031286-28031590 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 14-311 |
| Cow position: | chr10:57987060-57987367 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 17-384 |
| Cow position: | chr10:51780807-51781191 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 162 |
| Conread position: | 18-309 |
| Cow position: | chr10:45506805-45507093 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 19-311 |
| Cow position: | chr10:39038423-39038720 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 223 |
| Conread position: | 29-311 |
| Cow position: | chr10:42115876-42115591 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 48 |
| Conread position: | 30-309 |
| Cow position: | chr10:57090643-57090359 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 37-311 |
| Cow position: | chr10:1663345-1663625 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 175 |
| Conread position: | 38-311 |
| Cow position: | chr10:24309579-24309858 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 95 |
| Conread position: | 39-310 |
| Cow position: | chr10:32319064-32318795 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 174, 71 |
| Conread position: | 39-311 |
| Cow position: | chr10:4500565-4500299 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 181, 22 |
| Conread position: | 43-311 |
| Cow position: | chr10:24975222-24975496 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 96 |
| Conread position: | 44-311 |
| Cow position: | chr10:6002957-6003233 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 47-309 |
| Cow position: | chr10:31044946-31045203 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 152 |
| Conread position: | 51-309 |
| Cow position: | chr10:20381361-20381613 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 162, 65 |
| Conread position: | 58-310 |
| Cow position: | chr10:36467261-36467523 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 82-384 |
| Cow position: | chr10:41635957-41635635 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 310 |
| Conread position: | 97-295 |
| Cow position: | chr10:37074348-37074547 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 97-311 |
| Cow position: | chr10:39440716-39440497 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 139 |
| Conread position: | 98-311 |
| Cow position: | chr10:12546543-12546320 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 99-293 |
| Cow position: | chr10:22907653-22907854 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 108-311 |
| Cow position: | chr10:28948012-28947800 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 120-311 |
| Cow position: | chr10:11109133-11109334 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 125-311 |
| Cow position: | chr10:51086035-51085839 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 161-311 |
| Cow position: | chr10:41654790-41654636 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 161-384 |
| Cow position: | chr10:46193616-46193381 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 166-311 |
| Cow position: | chr10:55401245-55401090 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 170-311 |
| Cow position: | chr10:60362315-60362171 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 171-384 |
| Cow position: | chr10:22347431-22347201 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 176-295 |
| Cow position: | chr10:8458415-8458286 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 192-311 |
| Cow position: | chr10:14806329-14806206 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 60 |
Show alignments to all cow chromosomes.