Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-276
Cow position:
Alignm length: 280
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-305
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-308
Cow position:
Alignm length: 313
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 101

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position:
Alignm length: 324
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 1-309
Cow position:
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 49

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-310
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 62

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 32

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 173

Conread position: 1-311
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 277

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 1-311
Cow position:
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 246

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 34

Conread position: 1-312
Cow position:
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-312
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 2-296
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 122, 31

Conread position: 2-309
Cow position:
Alignm length: 317
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 240

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 244

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 131

Conread position: 2-311
Cow position:
Alignm length: 324
Alignm identity: 223
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 113

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 33

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 315
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 56

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 45

Conread position: 2-379
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 124

Conread position: 2-384
Cow position:
Alignm length: 407
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 3-311
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 30

Conread position: 3-311
Cow position:
Alignm length: 316
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 127

Conread position: 3-311
Cow position:
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 3-311
Cow position:
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 4-310
Cow position:
Alignm length: 316
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 139

Conread position: 4-311
Cow position:
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 65

Conread position: 6-309
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 133

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position:
Alignm length: 315
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 13-311
Cow position:
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 124

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 13-312
Cow position:
Alignm length: 307
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-384
Cow position:
Alignm length: 398
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 14-308
Cow position:
Alignm length: 305
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position:
Alignm length: 308
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 17-384
Cow position:
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 162

Conread position: 18-309
Cow position:
Alignm length: 298
Alignm identity: 193
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 17

Conread position: 19-311
Cow position:
Alignm length: 301
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 223

Conread position: 29-311
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 48

Conread position: 30-309
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 179

Conread position: 37-311
Cow position:
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 175

Conread position: 38-311
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 95

Conread position: 39-310
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 174, 71

Conread position: 39-311
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 181, 22

Conread position: 43-311
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 96

Conread position: 44-311
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 42, 132

Conread position: 47-309
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 152

Conread position: 51-309
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 162, 65

Conread position: 58-310
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 162, 0

Conread position: 82-384
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 310

Conread position: 97-295
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 122, 23

Conread position: 97-311
Cow position:
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 139

Conread position: 98-311
Cow position:
Alignm length: 224
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 99-293
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 50

Conread position: 108-311
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 41

Conread position: 120-311
Cow position:
Alignm length: 202
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 125-311
Cow position:
Alignm length: 197
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 161-311
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 12

Conread position: 161-384
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 58, 84

Conread position: 166-311
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 170-311
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 82, 44

Conread position: 171-384
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 31

Conread position: 176-295
Cow position:
Alignm length: 130
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 192-311
Cow position:
Alignm length: 125
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 60

Show alignments to all cow chromosomes.