Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-276
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 56

Conread position: 1-281
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 27

Conread position: 1-308
Cow position:
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 105

Conread position: 1-309
Cow position:
Alignm length: 315
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 33

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 101

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 50

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 132

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 45

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 311
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 49

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 46

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 95

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-312
Cow position:
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-379
Cow position:
Alignm length: 401
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 36

Conread position: 1-384
Cow position:
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 56

Conread position: 2-309
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 34

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 2-311
Cow position:
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 47

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 2-379
Cow position:
Alignm length: 397
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 293

Conread position: 2-384
Cow position:
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 32

Conread position: 3-302
Cow position:
Alignm length: 307
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 170

Conread position: 3-309
Cow position:
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 0

Conread position: 3-311
Cow position:
Alignm length: 316
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 3-311
Cow position:
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 278

Conread position: 3-311
Cow position:
Alignm length: 320
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 3-311
Cow position:
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 5-305
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 11-311
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 13-311
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 38

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 21

Conread position: 13-311
Cow position:
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 265

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 33

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-311
Cow position:
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 14-311
Cow position:
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 233

Conread position: 15-311
Cow position:
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 55

Conread position: 15-311
Cow position:
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 17-311
Cow position:
Alignm length: 305
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 26-311
Cow position:
Alignm length: 293
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 9

Conread position: 29-311
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 6

Conread position: 37-311
Cow position:
Alignm length: 282
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 56

Conread position: 37-311
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 214, 55

Conread position: 38-311
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 214, 88

Conread position: 42-311
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 93

Conread position: 53-376
Cow position:
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 115

Conread position: 63-311
Cow position:
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 119-311
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 65

Conread position: 133-311
Cow position:
Alignm length: 186
Alignm identity: 154
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 121, 0

Conread position: 159-311
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 39

Conread position: 171-311
Cow position:
Alignm length: 151
Alignm identity: 128
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 174-311
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 215-311
Cow position:
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.