Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-277
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 24

Conread position: 1-308
Cow position:
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 1-309
Cow position:
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-310
Cow position:
Alignm length: 317
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 158

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 17

Conread position: 1-311
Cow position:
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 33

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 54

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 88

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 184

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 210

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 27

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-380
Cow position:
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 68

Conread position: 2-305
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 36

Conread position: 2-309
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 91

Conread position: 2-309
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 74

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 180

Conread position: 2-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 90

Conread position: 3-308
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 34

Conread position: 3-311
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 100, 55

Conread position: 3-311
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 3-311
Cow position:
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 216

Conread position: 4-311
Cow position:
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 98

Conread position: 4-311
Cow position:
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 4-311
Cow position:
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 107

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 304
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 184

Conread position: 13-311
Cow position:
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 80

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 37

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 37

Conread position: 13-311
Cow position:
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 37

Conread position: 14-311
Cow position:
Alignm length: 307
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 145

Conread position: 24-311
Cow position:
Alignm length: 296
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 25-311
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 54

Conread position: 26-311
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 9

Conread position: 53-311
Cow position:
Alignm length: 264
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 49

Conread position: 80-311
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 11

Conread position: 80-311
Cow position:
Alignm length: 242
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 10

Conread position: 81-311
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 90

Conread position: 89-311
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 97, 124

Conread position: 94-311
Cow position:
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 108-311
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 17

Conread position: 114-310
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 147

Conread position: 118-311
Cow position:
Alignm length: 201
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 98

Conread position: 121-384
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 89

Conread position: 135-309
Cow position:
Alignm length: 182
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 178

Conread position: 146-276
Cow position:
Alignm length: 138
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 155-384
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 156-384
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 82

Conread position: 164-311
Cow position:
Alignm length: 158
Alignm identity: 134
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 182-311
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 59

Show alignments to all cow chromosomes.