Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-309 |
| Cow position: | chr14:16917489-16917806 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 1-309 |
| Cow position: | chr14:33679301-33679002 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 101 |
| Conread position: | 1-309 |
| Cow position: | chr14:41411984-41411667 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 1-309 |
| Cow position: | chr14:48827516-48827198 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 119 |
| Conread position: | 1-310 |
| Cow position: | chr14:9450294-9450610 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-310 |
| Cow position: | chr14:48361420-48361092 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:192291-191973 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:5531575-5531258 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:7988753-7988436 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:11475055-11475369 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 125 |
| Conread position: | 1-311 |
| Cow position: | chr14:13782099-13781784 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 91 |
| Conread position: | 1-311 |
| Cow position: | chr14:15273313-15273632 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:16997799-16998115 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:19549434-19549118 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 33 |
| Conread position: | 1-311 |
| Cow position: | chr14:22029233-22029548 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 33 |
| Conread position: | 1-311 |
| Cow position: | chr14:23255103-23255421 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 92 |
| Conread position: | 1-311 |
| Cow position: | chr14:28210138-28209818 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:30713543-30713863 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:34668549-34668870 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:34904593-34904274 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 200 |
| Conread position: | 1-311 |
| Cow position: | chr14:37226408-37226077 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:44260704-44260379 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 1-311 |
| Cow position: | chr14:46123367-46123048 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 92 |
| Conread position: | 1-311 |
| Cow position: | chr14:46434855-46434538 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 115 |
| Conread position: | 1-311 |
| Cow position: | chr14:46503928-46503612 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 212 |
| Conread position: | 1-311 |
| Cow position: | chr14:50113605-50113289 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 161 |
| Conread position: | 1-384 |
| Cow position: | chr14:35383412-35383802 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 1-384 |
| Cow position: | chr14:43560471-43560063 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 94 |
| Conread position: | 2-311 |
| Cow position: | chr14:32449199-32448880 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-311 |
| Cow position: | chr14:32472903-32473223 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 2-311 |
| Cow position: | chr14:32584791-32585105 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 240 |
| Conread position: | 2-380 |
| Cow position: | chr14:13581068-13580672 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-380 |
| Cow position: | chr14:14031147-14031543 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 70 |
| Conread position: | 3-311 |
| Cow position: | chr14:17758383-17758703 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 31 |
| Conread position: | 3-311 |
| Cow position: | chr14:24524184-24523865 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 3-311 |
| Cow position: | chr14:44554061-44553747 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 139 |
| Conread position: | 4-311 |
| Cow position: | chr14:19326023-19326339 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 190 |
| Conread position: | 4-311 |
| Cow position: | chr14:33491049-33490746 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 215, 25 |
| Conread position: | 5-311 |
| Cow position: | chr14:30665354-30665661 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 46 |
| Conread position: | 6-311 |
| Cow position: | chr14:24992902-24993200 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 269, 30 |
| Conread position: | 13-311 |
| Cow position: | chr14:1660679-1660376 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 29 |
| Conread position: | 13-311 |
| Cow position: | chr14:14421181-14421498 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 13-311 |
| Cow position: | chr14:44691407-44691100 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 13-311 |
| Cow position: | chr14:45087435-45087125 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 13-311 |
| Cow position: | chr14:46222309-46222001 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-384 |
| Cow position: | chr14:13237576-13237954 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 279 |
| Conread position: | 14-311 |
| Cow position: | chr14:45026730-45027035 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 14-384 |
| Cow position: | chr14:13861293-13861686 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 15-311 |
| Cow position: | chr14:46389036-46389339 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 232 |
| Conread position: | 24-309 |
| Cow position: | chr14:38813265-38813554 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 156, 9 |
| Conread position: | 26-309 |
| Cow position: | chr14:30130697-30130416 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 22 |
| Conread position: | 37-312 |
| Cow position: | chr14:9849703-9849975 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 96 |
| Conread position: | 38-311 |
| Cow position: | chr14:38915901-38916170 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 181, 31 |
| Conread position: | 41-384 |
| Cow position: | chr14:46468993-46469359 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 85 |
| Conread position: | 43-311 |
| Cow position: | chr14:449981-449712 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 53-311 |
| Cow position: | chr14:7474536-7474272 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 160 |
| Conread position: | 54-311 |
| Cow position: | chr14:36908018-36908285 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 57-311 |
| Cow position: | chr14:43557142-43556879 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 93-310 |
| Cow position: | chr14:13305252-13305026 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 127 |
| Conread position: | 109-311 |
| Cow position: | chr14:34763022-34763234 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 126-311 |
| Cow position: | chr14:30594092-30594285 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 141-311 |
| Cow position: | chr14:40344413-40344232 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 152-311 |
| Cow position: | chr14:13275402-13275237 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 159-311 |
| Cow position: | chr14:5515017-5514855 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 160-311 |
| Cow position: | chr14:2296567-2296406 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 166-311 |
| Cow position: | chr14:16807246-16807400 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 174-309 |
| Cow position: | chr14:17688916-17688771 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 174-311 |
| Cow position: | chr14:33391862-33392005 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 187-311 |
| Cow position: | chr14:40385868-40386002 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.