Cow genome map
Conread name: | rsin05_m18.y1 |
Conread position: | 1-304 |
Cow position: | chr15:42939150-42938837 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-310 |
Cow position: | chr15:4727446-4727129 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 1-311 |
Cow position: | chr15:2806637-2806953 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 0 |
Conread position: | 1-311 |
Cow position: | chr15:3258805-3259118 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 95 |
Conread position: | 1-311 |
Cow position: | chr15:4387990-4387675 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 45 |
Conread position: | 1-311 |
Cow position: | chr15:4639174-4638857 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 0 |
Conread position: | 1-311 |
Cow position: | chr15:5497296-5496982 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 198 |
Conread position: | 1-311 |
Cow position: | chr15:6563418-6563098 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr15:8358899-8358583 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 224 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 142, 42 |
Conread position: | 1-311 |
Cow position: | chr15:8753121-8752818 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 235 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 182, 51 |
Conread position: | 1-311 |
Cow position: | chr15:9395202-9394886 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 46 |
Conread position: | 1-311 |
Cow position: | chr15:12418469-12418787 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 31 |
Conread position: | 1-311 |
Cow position: | chr15:14579906-14580226 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 0 |
Conread position: | 1-311 |
Cow position: | chr15:15344864-15345184 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr15:18578951-18578632 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 148 |
Conread position: | 1-311 |
Cow position: | chr15:20405497-20405815 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 160 |
Conread position: | 1-311 |
Cow position: | chr15:20412838-20412519 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 1-311 |
Cow position: | chr15:21663503-21663821 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-311 |
Cow position: | chr15:27635668-27635348 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr15:31363706-31363386 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr15:42532161-42531841 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 1-311 |
Cow position: | chr15:43292936-43293246 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 33 |
Conread position: | 1-311 |
Cow position: | chr15:51219981-51219662 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 0 |
Conread position: | 1-384 |
Cow position: | chr15:14756238-14755846 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 32 |
Conread position: | 1-384 |
Cow position: | chr15:20457292-20456889 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 52 |
Conread position: | 2-304 |
Cow position: | chr15:36356847-36357154 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 33 |
Conread position: | 2-309 |
Cow position: | chr15:4673484-4673167 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-309 |
Cow position: | chr15:6551524-6551840 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 87 |
Conread position: | 2-311 |
Cow position: | chr15:2014739-2014427 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 203 |
Conread position: | 2-311 |
Cow position: | chr15:2900013-2900331 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 32 |
Conread position: | 2-311 |
Cow position: | chr15:6153692-6154009 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 33 |
Conread position: | 2-311 |
Cow position: | chr15:7262864-7262537 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 45 |
Conread position: | 2-311 |
Cow position: | chr15:7329529-7329839 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 232 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 19, 144 |
Conread position: | 2-311 |
Cow position: | chr15:12365644-12365338 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 2-311 |
Cow position: | chr15:16189530-16189849 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-311 |
Cow position: | chr15:24297433-24297114 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-311 |
Cow position: | chr15:29969119-29969424 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 74 |
Conread position: | 2-311 |
Cow position: | chr15:38982890-38982571 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-384 |
Cow position: | chr15:6119652-6119250 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 3-276 |
Cow position: | chr15:32702500-32702763 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 174 |
Conread position: | 3-278 |
Cow position: | chr15:20354239-20354520 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 149, 30 |
Conread position: | 3-310 |
Cow position: | chr15:14574064-14574387 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 230 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 64, 39 |
Conread position: | 3-311 |
Cow position: | chr15:27748248-27747930 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 3-311 |
Cow position: | chr15:32491651-32491968 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 0 |
Conread position: | 3-311 |
Cow position: | chr15:51911304-51911614 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 135 |
Conread position: | 3-312 |
Cow position: | chr15:7270579-7270265 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 210 |
Conread position: | 11-311 |
Cow position: | chr15:37472337-37472638 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 91 |
Conread position: | 12-311 |
Cow position: | chr15:21913753-21914056 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 222 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 169, 31 |
Conread position: | 13-309 |
Cow position: | chr15:32696394-32696076 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 51 |
Conread position: | 13-311 |
Cow position: | chr15:7565230-7564924 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 148 |
Conread position: | 13-311 |
Cow position: | chr15:10825698-10825393 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 112 |
Conread position: | 13-311 |
Cow position: | chr15:13430051-13429744 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 0 |
Conread position: | 13-311 |
Cow position: | chr15:18229293-18228985 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 0 |
Conread position: | 13-311 |
Cow position: | chr15:18265534-18265839 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 0 |
Conread position: | 13-311 |
Cow position: | chr15:20017249-20017557 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 0 |
Conread position: | 13-311 |
Cow position: | chr15:21533901-21534202 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 229 |
Conread position: | 13-311 |
Cow position: | chr15:36330231-36330537 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 21 |
Conread position: | 13-311 |
Cow position: | chr15:50149550-50149242 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 0 |
Conread position: | 13-384 |
Cow position: | chr15:31586169-31586567 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 37 |
Conread position: | 14-309 |
Cow position: | chr15:6280854-6280553 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 21 |
Conread position: | 20-311 |
Cow position: | chr15:4917418-4917119 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 103 |
Conread position: | 29-277 |
Cow position: | chr15:6066301-6066549 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 49 |
Conread position: | 29-311 |
Cow position: | chr15:7882130-7881841 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 6 |
Conread position: | 29-311 |
Cow position: | chr15:24796098-24795808 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 100 |
Conread position: | 33-311 |
Cow position: | chr15:9014098-9013814 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 12, 72 |
Conread position: | 39-311 |
Cow position: | chr15:16509066-16508785 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 133 |
Conread position: | 42-311 |
Cow position: | chr15:53411289-53411019 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 50 |
Conread position: | 43-384 |
Cow position: | chr15:29341854-29342190 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 14 |
Conread position: | 98-310 |
Cow position: | chr15:3721889-3722108 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 131-384 |
Cow position: | chr15:36669747-36669491 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 195 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 121, 31 |
Conread position: | 136-311 |
Cow position: | chr15:4924239-4924054 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 149 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 167-311 |
Cow position: | chr15:51767318-51767469 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 129 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 174-308 |
Cow position: | chr15:6224902-6224760 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 115 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 174-311 |
Cow position: | chr15:314014-314159 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 121 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 175-326 |
Cow position: | chr15:44072533-44072374 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 131 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 44, 30 |
Conread position: | 176-357 |
Cow position: | chr15:17406586-17406398 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 143 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 76, 30 |
Conread position: | 179-311 |
Cow position: | chr15:581481-581338 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 182-370 |
Cow position: | chr15:36279903-36280112 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 197-311 |
Cow position: | chr15:4767190-4767066 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.