Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-276
Cow position:
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 53

Conread position: 1-278
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 34

Conread position: 1-292
Cow position:
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 153

Conread position: 1-308
Cow position:
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 265

Conread position: 1-309
Cow position:
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-310
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 91

Conread position: 1-311
Cow position:
Alignm length: 317
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 243

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 66

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 155

Conread position: 1-311
Cow position:
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 52

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 33

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 202

Conread position: 1-311
Cow position:
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 133

Conread position: 1-311
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 80

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 148

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 33

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 129

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 52

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 128, 143

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-330
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 175

Conread position: 1-349
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-384
Cow position:
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 161

Conread position: 1-384
Cow position:
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 33

Conread position: 2-309
Cow position:
Alignm length: 317
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 196

Conread position: 2-311
Cow position:
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 249

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 234

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 2-311
Cow position:
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 186

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 106

Conread position: 2-384
Cow position:
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 169

Conread position: 3-311
Cow position:
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 3-311
Cow position:
Alignm length: 321
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 200

Conread position: 3-311
Cow position:
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 3-311
Cow position:
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 13-276
Cow position:
Alignm length: 266
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 37

Conread position: 13-309
Cow position:
Alignm length: 307
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-310
Cow position:
Alignm length: 313
Alignm identity: 205
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 93

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 150

Conread position: 13-311
Cow position:
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 37

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 79

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 22

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 35

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 253

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-384
Cow position:
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 43

Conread position: 14-309
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 27

Conread position: 14-310
Cow position:
Alignm length: 313
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 14-311
Cow position:
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-311
Cow position:
Alignm length: 308
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 14-311
Cow position:
Alignm length: 305
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 36-311
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 103

Conread position: 37-276
Cow position:
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 7

Conread position: 37-311
Cow position:
Alignm length: 286
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 16

Conread position: 44-276
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 175, 108

Conread position: 44-311
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 87

Conread position: 46-308
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 58

Conread position: 52-311
Cow position:
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 185

Conread position: 55-311
Cow position:
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 68-311
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 233

Conread position: 73-311
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 59

Conread position: 85-311
Cow position:
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 71

Conread position: 96-311
Cow position:
Alignm length: 226
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 82

Conread position: 97-311
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 61

Conread position: 109-311
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 43

Conread position: 117-311
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 129-311
Cow position:
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 55

Conread position: 133-311
Cow position:
Alignm length: 189
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 72

Conread position: 158-311
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 147

Conread position: 159-311
Cow position:
Alignm length: 161
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 92

Conread position: 160-311
Cow position:
Alignm length: 157
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 40

Conread position: 160-311
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 14

Conread position: 166-311
Cow position:
Alignm length: 156
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 174-311
Cow position:
Alignm length: 146
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 81

Conread position: 186-311
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 125

Show alignments to all cow chromosomes.