Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 14

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 199

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 214

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 201

Conread position: 1-311
Cow position:
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 33

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 0

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 243

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 245

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 209

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 47

Conread position: 1-366
Cow position:
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 34

Conread position: 1-383
Cow position:
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-384
Cow position:
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 32

Conread position: 2-311
Cow position:
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 209

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 26

Conread position: 2-380
Cow position:
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 3-309
Cow position:
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 37

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 37

Conread position: 13-311
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 135

Conread position: 16-310
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 23-311
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 12

Conread position: 28-311
Cow position:
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 23

Conread position: 29-311
Cow position:
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 5

Conread position: 34-311
Cow position:
Alignm length: 288
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 37-311
Cow position:
Alignm length: 282
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 57-311
Cow position:
Alignm length: 265
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 68-311
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 19

Conread position: 75-311
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 84-310
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 96

Conread position: 144-311
Cow position:
Alignm length: 176
Alignm identity: 146
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 145-311
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 74, 25

Conread position: 174-311
Cow position:
Alignm length: 146
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 26

Conread position: 182-311
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 182-311
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 209-311
Cow position:
Alignm length: 110
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 212-384
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.