Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-310 |
| Cow position: | chr17:1655294-1655608 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 1-311 |
| Cow position: | chr17:137099-136780 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:253279-252962 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 199 |
| Conread position: | 1-311 |
| Cow position: | chr17:452292-451975 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:1569930-1570246 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 214 |
| Conread position: | 1-311 |
| Cow position: | chr17:4062789-4062476 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 201 |
| Conread position: | 1-311 |
| Cow position: | chr17:6070992-6070683 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 33 |
| Conread position: | 1-311 |
| Cow position: | chr17:6262320-6262002 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:8204386-8204073 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 243 |
| Conread position: | 1-311 |
| Cow position: | chr17:11380730-11381051 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:15709533-15709853 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:16855638-16855961 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 1-311 |
| Cow position: | chr17:16903342-16903026 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 245 |
| Conread position: | 1-311 |
| Cow position: | chr17:24784626-24784312 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 209 |
| Conread position: | 1-311 |
| Cow position: | chr17:25738757-25738437 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 1-311 |
| Cow position: | chr17:29825511-29825825 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 47 |
| Conread position: | 1-366 |
| Cow position: | chr17:20097858-20098238 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 1-383 |
| Cow position: | chr17:15438255-15437858 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-384 |
| Cow position: | chr17:16897640-16898036 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 32 |
| Conread position: | 2-311 |
| Cow position: | chr17:147389-147067 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-311 |
| Cow position: | chr17:13930350-13930031 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-311 |
| Cow position: | chr17:21768656-21768971 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 209 |
| Conread position: | 2-311 |
| Cow position: | chr17:41012040-41011724 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 26 |
| Conread position: | 2-380 |
| Cow position: | chr17:36816150-36815758 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 3-309 |
| Cow position: | chr17:14242282-14241958 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 13-311 |
| Cow position: | chr17:3742608-3742300 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr17:13418848-13418540 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr17:15140898-15141193 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 37 |
| Conread position: | 13-311 |
| Cow position: | chr17:15808419-15808110 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr17:17257963-17257659 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 37 |
| Conread position: | 13-311 |
| Cow position: | chr17:18124492-18124788 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 135 |
| Conread position: | 16-310 |
| Cow position: | chr17:3284316-3284020 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 23-311 |
| Cow position: | chr17:4162000-4162309 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 28-311 |
| Cow position: | chr17:2245616-2245905 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 23 |
| Conread position: | 29-311 |
| Cow position: | chr17:33282910-33283194 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 34-311 |
| Cow position: | chr17:2553834-2554121 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 37-311 |
| Cow position: | chr17:11085258-11085539 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 57-311 |
| Cow position: | chr17:34575162-34574898 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 68-311 |
| Cow position: | chr17:3236336-3236104 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 131, 19 |
| Conread position: | 75-311 |
| Cow position: | chr17:28026105-28026352 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 84-310 |
| Cow position: | chr17:6080889-6080655 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 96 |
| Conread position: | 144-311 |
| Cow position: | chr17:19216393-19216568 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 145-311 |
| Cow position: | chr17:14897275-14897101 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 174-311 |
| Cow position: | chr17:22562190-22562047 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 182-311 |
| Cow position: | chr17:52580-52720 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 182-311 |
| Cow position: | chr17:14935660-14935799 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 209-311 |
| Cow position: | chr17:29303023-29302914 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 212-384 |
| Cow position: | chr17:35990372-35990562 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.