Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-276 |
| Cow position: | chr20:28724400-28724134 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 1-280 |
| Cow position: | chr20:35844670-35844950 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 27 |
| Conread position: | 1-290 |
| Cow position: | chr20:12568668-12568966 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 86 |
| Conread position: | 1-311 |
| Cow position: | chr20:825423-825106 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 193 |
| Conread position: | 1-311 |
| Cow position: | chr20:5537572-5537256 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 162 |
| Conread position: | 1-311 |
| Cow position: | chr20:10867141-10867461 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-311 |
| Cow position: | chr20:10922275-10922595 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 158 |
| Conread position: | 1-311 |
| Cow position: | chr20:12435753-12436070 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr20:15294611-15294303 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 221 |
| Conread position: | 1-311 |
| Cow position: | chr20:19440558-19440242 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 97 |
| Conread position: | 1-311 |
| Cow position: | chr20:23467021-23467340 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 12 |
| Conread position: | 1-311 |
| Cow position: | chr20:23801535-23801215 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 1-311 |
| Cow position: | chr20:23805234-23805553 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 151 |
| Conread position: | 1-311 |
| Cow position: | chr20:25845977-25846290 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 147 |
| Conread position: | 1-311 |
| Cow position: | chr20:27876125-27875808 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 64 |
| Conread position: | 1-311 |
| Cow position: | chr20:30578531-30578215 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 1-311 |
| Cow position: | chr20:30688216-30687898 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 71 |
| Conread position: | 2-311 |
| Cow position: | chr20:7513985-7513664 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-311 |
| Cow position: | chr20:13765539-13765221 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 73 |
| Conread position: | 2-311 |
| Cow position: | chr20:15095260-15095574 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 240 |
| Conread position: | 2-383 |
| Cow position: | chr20:13500938-13500543 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 27 |
| Conread position: | 3-311 |
| Cow position: | chr20:27345325-27345622 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 31 |
| Conread position: | 4-309 |
| Cow position: | chr20:17659106-17659417 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 49 |
| Conread position: | 11-277 |
| Cow position: | chr20:13954287-13954031 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 13-308 |
| Cow position: | chr20:20440320-20440623 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 148 |
| Conread position: | 13-310 |
| Cow position: | chr20:24542057-24541750 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr20:8971260-8971555 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 103 |
| Conread position: | 13-311 |
| Cow position: | chr20:18093553-18093861 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr20:21719200-21718889 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 16-311 |
| Cow position: | chr20:34459680-34459980 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 64 |
| Conread position: | 25-311 |
| Cow position: | chr20:7598237-7598528 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 87 |
| Conread position: | 37-306 |
| Cow position: | chr20:8095374-8095629 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 215, 16 |
| Conread position: | 37-311 |
| Cow position: | chr20:19424653-19424381 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 43-276 |
| Cow position: | chr20:19844392-19844158 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 203 |
| Conread position: | 55-311 |
| Cow position: | chr20:29757688-29757954 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 64-311 |
| Cow position: | chr20:28280394-28280139 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 82-308 |
| Cow position: | chr20:3677752-3677981 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 83-281 |
| Cow position: | chr20:35131461-35131249 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 144-311 |
| Cow position: | chr20:21917147-21916970 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 184-312 |
| Cow position: | chr20:8214810-8214943 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.