Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-276 |
| Cow position: | chr22:25969063-25969332 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 65 |
| Conread position: | 1-309 |
| Cow position: | chr22:10933643-10933956 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 189 |
| Conread position: | 1-309 |
| Cow position: | chr22:22956729-22957044 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-310 |
| Cow position: | chr22:28784701-28784382 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:558121-558438 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:1708504-1708194 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 86 |
| Conread position: | 1-311 |
| Cow position: | chr22:2562163-2562499 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:5931504-5931812 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 148 |
| Conread position: | 1-311 |
| Cow position: | chr22:6334393-6334079 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 183 |
| Conread position: | 1-311 |
| Cow position: | chr22:7279124-7278810 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 129 |
| Conread position: | 1-311 |
| Cow position: | chr22:8132206-8132519 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 49 |
| Conread position: | 1-311 |
| Cow position: | chr22:13767908-13767602 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 155 |
| Conread position: | 1-311 |
| Cow position: | chr22:17325899-17326218 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:18029857-18029537 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 165 |
| Conread position: | 1-311 |
| Cow position: | chr22:19141107-19141423 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 112 |
| Conread position: | 1-311 |
| Cow position: | chr22:24818181-24818490 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 1-311 |
| Cow position: | chr22:28713259-28712942 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:31315124-31314804 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:31332291-31332618 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:32205642-32205331 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 1-311 |
| Cow position: | chr22:36858955-36859283 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-311 |
| Cow position: | chr22:37536892-37537210 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 81 |
| Conread position: | 1-311 |
| Cow position: | chr22:39039396-39039706 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 45 |
| Conread position: | 1-311 |
| Cow position: | chr22:40372990-40372674 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 146 |
| Conread position: | 1-311 |
| Cow position: | chr22:42993758-42993439 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 115 |
| Conread position: | 1-311 |
| Cow position: | chr22:44936525-44936205 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 177 |
| Conread position: | 1-311 |
| Cow position: | chr22:45280529-45280207 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1-380 |
| Cow position: | chr22:44100759-44101152 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 148 |
| Conread position: | 2-309 |
| Cow position: | chr22:15854018-15853704 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr22:539713-539397 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr22:1482995-1482679 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 2-311 |
| Cow position: | chr22:8118660-8118977 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 2-311 |
| Cow position: | chr22:18604226-18604534 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 139 |
| Conread position: | 2-311 |
| Cow position: | chr22:21592006-21591691 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 210 |
| Conread position: | 2-311 |
| Cow position: | chr22:39466931-39467246 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 154 |
| Conread position: | 2-311 |
| Cow position: | chr22:43046784-43047090 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 213, 65 |
| Conread position: | 3-311 |
| Cow position: | chr22:11802467-11802786 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-311 |
| Cow position: | chr22:13775085-13774776 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 194 |
| Conread position: | 6-311 |
| Cow position: | chr22:13546331-13546646 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 13-311 |
| Cow position: | chr22:10577920-10578224 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 37 |
| Conread position: | 13-311 |
| Cow position: | chr22:18614845-18614549 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 161 |
| Conread position: | 13-311 |
| Cow position: | chr22:20238264-20238569 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 13-311 |
| Cow position: | chr22:21193633-21193937 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 37 |
| Conread position: | 13-311 |
| Cow position: | chr22:26105573-26105885 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 13-311 |
| Cow position: | chr22:43235405-43235110 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 64 |
| Conread position: | 14-311 |
| Cow position: | chr22:28555598-28555905 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 14-312 |
| Cow position: | chr22:36186197-36185891 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 94 |
| Conread position: | 17-310 |
| Cow position: | chr22:36544388-36544688 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 83 |
| Conread position: | 18-311 |
| Cow position: | chr22:17994747-17995047 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 18-384 |
| Cow position: | chr22:44399001-44398613 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 19-299 |
| Cow position: | chr22:50604-50313 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 35-310 |
| Cow position: | chr22:15309409-15309688 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 188 |
| Conread position: | 37-311 |
| Cow position: | chr22:35918603-35918328 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 168 |
| Conread position: | 37-311 |
| Cow position: | chr22:35935972-35935712 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 97 |
| Conread position: | 43-309 |
| Cow position: | chr22:36585301-36585577 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 44-311 |
| Cow position: | chr22:14088433-14088707 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 176, 21 |
| Conread position: | 46-311 |
| Cow position: | chr22:9274900-9274642 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 233, 38 |
| Conread position: | 63-306 |
| Cow position: | chr22:44516642-44516895 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 70-311 |
| Cow position: | chr22:18842668-18842424 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 146, 60 |
| Conread position: | 82-311 |
| Cow position: | chr22:10549145-10548909 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 100-311 |
| Cow position: | chr22:4248842-4249057 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 133-311 |
| Cow position: | chr22:12729240-12729423 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 143-311 |
| Cow position: | chr22:11806312-11806485 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 145-311 |
| Cow position: | chr22:3515888-3516066 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 176-311 |
| Cow position: | chr22:8825921-8826061 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 45 |
Show alignments to all cow chromosomes.