Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-304 |
| Cow position: | chr23:14264924-14264613 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-308 |
| Cow position: | chr23:5625002-5625306 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 148 |
| Conread position: | 1-309 |
| Cow position: | chr23:14971371-14971686 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 165 |
| Conread position: | 1-311 |
| Cow position: | chr23:1049949-1050269 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 52 |
| Conread position: | 1-311 |
| Cow position: | chr23:2792188-2792502 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 221 |
| Conread position: | 1-311 |
| Cow position: | chr23:4516117-4515797 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 1-311 |
| Cow position: | chr23:4891268-4890950 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 71 |
| Conread position: | 1-311 |
| Cow position: | chr23:7313516-7313836 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:11781372-11781053 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:15528163-15527846 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:15568346-15568667 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:16496692-16496990 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 161 |
| Conread position: | 1-311 |
| Cow position: | chr23:16612223-16612536 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 34 |
| Conread position: | 1-311 |
| Cow position: | chr23:19492134-19491814 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:22144725-22145044 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 109 |
| Conread position: | 1-311 |
| Cow position: | chr23:25350933-25350613 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:29442521-29442834 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 239 |
| Conread position: | 1-311 |
| Cow position: | chr23:30212267-30212570 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 103 |
| Conread position: | 1-311 |
| Cow position: | chr23:32009072-32008762 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 45 |
| Conread position: | 1-311 |
| Cow position: | chr23:36028804-36029124 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:36097396-36097076 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr23:37199941-37200258 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-314 |
| Cow position: | chr23:21773336-21773658 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 318 |
| Conread position: | 1-370 |
| Cow position: | chr23:4308600-4308997 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 1-384 |
| Cow position: | chr23:2411060-2411456 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 194 |
| Conread position: | 2-311 |
| Cow position: | chr23:15179643-15179327 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr23:28221282-28220966 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr23:35926071-35925771 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 24 |
| Conread position: | 2-384 |
| Cow position: | chr23:4436230-4435826 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 43 |
| Conread position: | 2-384 |
| Cow position: | chr23:38580235-38579841 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 182 |
| Conread position: | 3-310 |
| Cow position: | chr23:16056315-16056021 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 48 |
| Conread position: | 3-311 |
| Cow position: | chr23:5871988-5872301 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 14-311 |
| Cow position: | chr23:22169451-22169142 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 21-311 |
| Cow position: | chr23:1958719-1958422 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 44-311 |
| Cow position: | chr23:528615-528332 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 60-311 |
| Cow position: | chr23:19441348-19441606 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 144 |
| Conread position: | 63-311 |
| Cow position: | chr23:4266328-4266585 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 80-311 |
| Cow position: | chr23:28305430-28305192 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 96-284 |
| Cow position: | chr23:1249243-1249050 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 111-311 |
| Cow position: | chr23:30635382-30635580 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 164 |
| Conread position: | 116-311 |
| Cow position: | chr23:6222096-6221898 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 117-312 |
| Cow position: | chr23:17845346-17845141 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 144-312 |
| Cow position: | chr23:31165262-31165084 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 174-311 |
| Cow position: | chr23:4638205-4638352 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 178-309 |
| Cow position: | chr23:1204943-1204800 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 212-311 |
| Cow position: | chr23:21792106-21792212 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.