Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-310 |
| Cow position: | chr25:18489387-18489067 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 80 |
| Conread position: | 1-311 |
| Cow position: | chr25:11930185-11930469 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 21 |
| Conread position: | 1-311 |
| Cow position: | chr25:13959435-13959125 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 1-311 |
| Cow position: | chr25:18887104-18887427 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 128 |
| Conread position: | 1-311 |
| Cow position: | chr25:20632257-20631940 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr25:26281387-26281070 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 0 |
| Conread position: | 1-311 |
| Cow position: | chr25:26900901-26900584 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr25:28862234-28861923 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 151 |
| Conread position: | 1-311 |
| Cow position: | chr25:34344337-34344657 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 1-311 |
| Cow position: | chr25:34510382-34510698 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 219 |
| Conread position: | 1-311 |
| Cow position: | chr25:34667368-34667678 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 37 |
| Conread position: | 1-384 |
| Cow position: | chr25:35626846-35627237 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 2-311 |
| Cow position: | chr25:13785216-13784898 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 2-311 |
| Cow position: | chr25:24656069-24656388 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 3-280 |
| Cow position: | chr25:23360552-23360268 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 4-311 |
| Cow position: | chr25:17657007-17656703 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 112 |
| Conread position: | 13-311 |
| Cow position: | chr25:13352323-13352014 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 13-311 |
| Cow position: | chr25:20772979-20773287 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 13-311 |
| Cow position: | chr25:34505461-34505768 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 14-311 |
| Cow position: | chr25:18191037-18191340 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 77 |
| Conread position: | 19-311 |
| Cow position: | chr25:29359376-29359077 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 0 |
| Conread position: | 19-311 |
| Cow position: | chr25:30810167-30809886 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 117 |
| Conread position: | 26-311 |
| Cow position: | chr25:12700310-12700023 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 9 |
| Conread position: | 33-309 |
| Cow position: | chr25:18250313-18250609 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 30, 72 |
| Conread position: | 44-309 |
| Cow position: | chr25:10136025-10135756 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 45-311 |
| Cow position: | chr25:25509286-25509018 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 171, 91 |
| Conread position: | 63-311 |
| Cow position: | chr25:34674216-34673962 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 7 |
| Conread position: | 120-311 |
| Cow position: | chr25:12939928-12940126 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 129-309 |
| Cow position: | chr25:26354841-26354651 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 174-311 |
| Cow position: | chr25:15617222-15617075 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.