Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-309 |
| Cow position: | chr27:1535759-1535450 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 1-309 |
| Cow position: | chr27:15273499-15273813 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 1-310 |
| Cow position: | chr27:27289075-27288756 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr27:9332321-9332001 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 1-311 |
| Cow position: | chr27:15034518-15034839 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr27:19524138-19524458 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr27:28294287-28294602 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 1-311 |
| Cow position: | chr27:30034742-30034422 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 1-384 |
| Cow position: | chr27:12749607-12749216 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 1-384 |
| Cow position: | chr27:23318347-23318743 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 2-311 |
| Cow position: | chr27:3232948-3233264 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-311 |
| Cow position: | chr27:8200380-8200066 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 154 |
| Conread position: | 2-311 |
| Cow position: | chr27:22797877-22798192 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 48 |
| Conread position: | 2-311 |
| Cow position: | chr27:24296668-24296987 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr27:26327635-26327320 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 2-370 |
| Cow position: | chr27:15374402-15374031 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 177, 23 |
| Conread position: | 3-311 |
| Cow position: | chr27:20809987-20809669 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 3-311 |
| Cow position: | chr27:27729901-27730208 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 26 |
| Conread position: | 3-383 |
| Cow position: | chr27:166340-166741 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 13-310 |
| Cow position: | chr27:797045-797349 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 13-311 |
| Cow position: | chr27:22742824-22743125 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 37 |
| Conread position: | 13-311 |
| Cow position: | chr27:26599490-26599198 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 68 |
| Conread position: | 14-311 |
| Cow position: | chr27:25801612-25801919 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 24-311 |
| Cow position: | chr27:9990660-9990950 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 178 |
| Conread position: | 35-311 |
| Cow position: | chr27:4981920-4981638 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 38-311 |
| Cow position: | chr27:8591608-8591322 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 128-311 |
| Cow position: | chr27:5985312-5985119 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 182-309 |
| Cow position: | chr27:25884507-25884646 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 205-311 |
| Cow position: | chr27:1211738-1211625 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.