Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-308 |
| Cow position: | chr29:42256390-42256700 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 49 |
| Conread position: | 1-309 |
| Cow position: | chr29:27977235-27977555 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 1-310 |
| Cow position: | chr29:26162245-26162563 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 148 |
| Conread position: | 1-311 |
| Cow position: | chr29:107648-107334 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 43 |
| Conread position: | 1-311 |
| Cow position: | chr29:408671-408984 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 33 |
| Conread position: | 1-311 |
| Cow position: | chr29:608042-608356 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 47 |
| Conread position: | 1-311 |
| Cow position: | chr29:6219208-6219511 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 102 |
| Conread position: | 1-311 |
| Cow position: | chr29:6263409-6263726 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:6934083-6933768 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 188 |
| Conread position: | 1-311 |
| Cow position: | chr29:10644820-10645137 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:14500457-14500138 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 115 |
| Conread position: | 1-311 |
| Cow position: | chr29:15624107-15624431 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:15966962-15967282 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:16346797-16346478 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:17407730-17407405 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:19525698-19526014 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 188 |
| Conread position: | 1-311 |
| Cow position: | chr29:21430266-21430581 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 49 |
| Conread position: | 1-311 |
| Cow position: | chr29:23979302-23978980 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:25929927-25930245 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 20 |
| Conread position: | 1-311 |
| Cow position: | chr29:27260530-27260841 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 211 |
| Conread position: | 1-311 |
| Cow position: | chr29:32557154-32557474 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:35274428-35274748 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr29:43326091-43325786 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 101 |
| Conread position: | 1-311 |
| Cow position: | chr29:45207103-45206787 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 1-311 |
| Cow position: | chr29:45625938-45625620 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 47 |
| Conread position: | 1-321 |
| Cow position: | chr29:45461824-45461495 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 155 |
| Conread position: | 1-384 |
| Cow position: | chr29:8624605-8625005 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 45 |
| Conread position: | 1-384 |
| Cow position: | chr29:19620677-19621081 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 2-275 |
| Cow position: | chr29:2693036-2692765 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 44 |
| Conread position: | 2-310 |
| Cow position: | chr29:15995789-15996106 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 32 |
| Conread position: | 2-311 |
| Cow position: | chr29:45870-46184 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 63 |
| Conread position: | 2-311 |
| Cow position: | chr29:2464280-2464599 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr29:2838746-2839065 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 2-311 |
| Cow position: | chr29:4518490-4518176 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 2-311 |
| Cow position: | chr29:5980133-5980449 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 2-311 |
| Cow position: | chr29:7428521-7428841 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr29:19656494-19656175 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 2-311 |
| Cow position: | chr29:20253756-20253446 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 2-311 |
| Cow position: | chr29:39077126-39077440 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 31 |
| Conread position: | 3-311 |
| Cow position: | chr29:529809-530125 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 3-311 |
| Cow position: | chr29:13057341-13057018 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 81 |
| Conread position: | 3-311 |
| Cow position: | chr29:28657780-28658098 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 3-311 |
| Cow position: | chr29:35299510-35299197 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 247 |
| Conread position: | 13-286 |
| Cow position: | chr29:32514904-32514629 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 65 |
| Conread position: | 13-311 |
| Cow position: | chr29:5785392-5785084 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr29:14208969-14209274 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 13-311 |
| Cow position: | chr29:15260410-15260718 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr29:16689411-16689106 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 55 |
| Conread position: | 13-311 |
| Cow position: | chr29:31183987-31183679 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr29:39424559-39424867 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 14-311 |
| Cow position: | chr29:13019266-13018967 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 105 |
| Conread position: | 15-311 |
| Cow position: | chr29:40470989-40470687 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 67 |
| Conread position: | 16-384 |
| Cow position: | chr29:34739260-34739636 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 19-311 |
| Cow position: | chr29:13584789-13584493 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 36 |
| Conread position: | 29-311 |
| Cow position: | chr29:34333709-34333984 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 37-311 |
| Cow position: | chr29:16013729-16014012 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 115, 11 |
| Conread position: | 59-311 |
| Cow position: | chr29:17152839-17152600 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 160, 41 |
| Conread position: | 88-311 |
| Cow position: | chr29:14082221-14082450 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 108-308 |
| Cow position: | chr29:21537078-21536876 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 83 |
| Conread position: | 127-311 |
| Cow position: | chr29:14743581-14743775 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 144-311 |
| Cow position: | chr29:10021877-10022054 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 151 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 154-311 |
| Cow position: | chr29:18524281-18524447 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 159-384 |
| Cow position: | chr29:32642678-32642428 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 175-311 |
| Cow position: | chr29:1477586-1477434 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 178-311 |
| Cow position: | chr29:40500598-40500739 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 182-312 |
| Cow position: | chr29:5237428-5237288 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 185-311 |
| Cow position: | chr29:34797395-34797532 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 192-311 |
| Cow position: | chr29:35003015-35003142 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 114 |
Show alignments to all cow chromosomes.