Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-277
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 219, 21

Conread position: 1-309
Cow position:
Alignm length: 317
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 78

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-309
Cow position:
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 224

Conread position: 1-310
Cow position:
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-310
Cow position:
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 237

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 134

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 50

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 41

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 242

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 236

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 49

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 186

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 317
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-311
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 16

Conread position: 1-311
Cow position:
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 183

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 158

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 267

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 97

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 27

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 146

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 211

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 1-311
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 234

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 2-277
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 218, 33

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 152

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 114

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 11

Conread position: 2-311
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 210

Conread position: 2-311
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 103

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 3-299
Cow position:
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 3-309
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 31

Conread position: 3-311
Cow position:
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 3-311
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 243

Conread position: 3-311
Cow position:
Alignm length: 316
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 3-311
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 67

Conread position: 3-311
Cow position:
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 252

Conread position: 3-384
Cow position:
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 170

Conread position: 13-309
Cow position:
Alignm length: 304
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 37

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 153

Conread position: 13-311
Cow position:
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 90

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 97

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 37

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 22

Conread position: 15-311
Cow position:
Alignm length: 307
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 16-311
Cow position:
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 77

Conread position: 19-311
Cow position:
Alignm length: 299
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 20-308
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 37-311
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 82

Conread position: 38-275
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 12

Conread position: 43-311
Cow position:
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 43-384
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 44-311
Cow position:
Alignm length: 278
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 60-311
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 65-311
Cow position:
Alignm length: 257
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 70-311
Cow position:
Alignm length: 249
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 88-311
Cow position:
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 141

Conread position: 94-379
Cow position:
Alignm length: 312
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 305

Conread position: 118-312
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 120-311
Cow position:
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 129-311
Cow position:
Alignm length: 192
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 142-308
Cow position:
Alignm length: 177
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 142-311
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 61

Conread position: 144-311
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 55

Conread position: 149-311
Cow position:
Alignm length: 173
Alignm identity: 148
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 70, 21

Conread position: 157-311
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 47

Conread position: 159-311
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 160-311
Cow position:
Alignm length: 162
Alignm identity: 140
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 174-311
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 175-306
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 37

Conread position: 178-311
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 27

Conread position: 200-311
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.