Cow genome map
| Conread name: | rsin05_m18.y1 |
| Conread position: | 1-311 |
| Cow position: | chr4:358194-357886 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 221 |
| Conread position: | 1-311 |
| Cow position: | chr4:1047941-1048268 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:1928312-1928628 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 142 |
| Conread position: | 1-311 |
| Cow position: | chr4:2350406-2350726 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:3069239-3068934 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 45 |
| Conread position: | 1-311 |
| Cow position: | chr4:3449106-3448783 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 101 |
| Conread position: | 1-311 |
| Cow position: | chr4:4378704-4378382 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:6266902-6267222 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:6488059-6488373 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 34 |
| Conread position: | 1-311 |
| Cow position: | chr4:9797931-9798244 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 76 |
| Conread position: | 1-311 |
| Cow position: | chr4:14141428-14141110 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 125 |
| Conread position: | 1-311 |
| Cow position: | chr4:16362515-16362199 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 52 |
| Conread position: | 1-311 |
| Cow position: | chr4:16640922-16640605 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:18815289-18815605 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 164 |
| Conread position: | 1-311 |
| Cow position: | chr4:23305029-23305337 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 1-311 |
| Cow position: | chr4:25597176-25597492 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 34 |
| Conread position: | 1-311 |
| Cow position: | chr4:35306503-35306813 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 67 |
| Conread position: | 1-311 |
| Cow position: | chr4:36898691-36898373 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 240 |
| Conread position: | 1-311 |
| Cow position: | chr4:41977336-41977645 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 1-311 |
| Cow position: | chr4:42406933-42406616 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:43317337-43317657 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:43883426-43883107 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 151 |
| Conread position: | 1-311 |
| Cow position: | chr4:48029172-48028855 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:57986330-57986010 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-311 |
| Cow position: | chr4:67683507-67683190 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 1-312 |
| Cow position: | chr4:47751658-47751341 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 264 |
| Conread position: | 1-366 |
| Cow position: | chr4:64799366-64798991 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 45 |
| Conread position: | 1-380 |
| Cow position: | chr4:15815184-15815584 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 64 |
| Conread position: | 1-384 |
| Cow position: | chr4:5611682-5612092 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 1-384 |
| Cow position: | chr4:34182393-34182792 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 87 |
| Conread position: | 2-311 |
| Cow position: | chr4:10883844-10883533 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 32 |
| Conread position: | 2-311 |
| Cow position: | chr4:46712287-46712601 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 51 |
| Conread position: | 2-311 |
| Cow position: | chr4:54189002-54188684 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 149 |
| Conread position: | 2-311 |
| Cow position: | chr4:55510535-55510847 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 148 |
| Conread position: | 2-311 |
| Cow position: | chr4:61241591-61241278 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 2-312 |
| Cow position: | chr4:67382596-67382282 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 182 |
| Conread position: | 2-384 |
| Cow position: | chr4:161477-161072 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 171 |
| Conread position: | 3-311 |
| Cow position: | chr4:11108762-11109071 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 84 |
| Conread position: | 3-311 |
| Cow position: | chr4:16061590-16061272 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 12-311 |
| Cow position: | chr4:10055248-10054950 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 22 |
| Conread position: | 13-304 |
| Cow position: | chr4:532182-531881 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr4:3128120-3127812 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr4:17923657-17923965 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 13-311 |
| Cow position: | chr4:18336648-18336956 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr4:21574061-21573760 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 37 |
| Conread position: | 13-311 |
| Cow position: | chr4:32214474-32214170 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 180 |
| Conread position: | 13-311 |
| Cow position: | chr4:33021328-33021636 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 13-311 |
| Cow position: | chr4:41473543-41473847 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 199 |
| Conread position: | 13-311 |
| Cow position: | chr4:58622227-58622535 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 15-311 |
| Cow position: | chr4:27336234-27335928 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 17-310 |
| Cow position: | chr4:43414206-43413909 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 17-311 |
| Cow position: | chr4:11391194-11391481 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 12 |
| Conread position: | 17-311 |
| Cow position: | chr4:19095991-19095696 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 203, 27 |
| Conread position: | 19-309 |
| Cow position: | chr4:34176690-34176990 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 19-311 |
| Cow position: | chr4:15459112-15459414 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 29-311 |
| Cow position: | chr4:5442246-5442535 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 38-309 |
| Cow position: | chr4:50976868-50976599 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 95 |
| Conread position: | 38-311 |
| Cow position: | chr4:25736990-25736716 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 97 |
| Conread position: | 38-384 |
| Cow position: | chr4:20605924-20605554 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 49 |
| Conread position: | 42-309 |
| Cow position: | chr4:42968824-42969101 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 65-311 |
| Cow position: | chr4:54971693-54971442 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 15, 178 |
| Conread position: | 106-311 |
| Cow position: | chr4:31563013-31563224 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 195 |
| Conread position: | 144-311 |
| Cow position: | chr4:30473382-30473208 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 174-311 |
| Cow position: | chr4:13495462-13495325 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 179-370 |
| Cow position: | chr4:60262045-60262258 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.