Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-310
Cow position:
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 254

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 50

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 204

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 177

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position:
Alignm length: 328
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 32

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 99

Conread position: 1-311
Cow position:
Alignm length: 316
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 245

Conread position: 1-311
Cow position:
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 61

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 51

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 54

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 194

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 1-370
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 218, 71

Conread position: 1-370
Cow position:
Alignm length: 403
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 1-380
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 1-384
Cow position:
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-384
Cow position:
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 97

Conread position: 1-384
Cow position:
Alignm length: 402
Alignm identity: 276
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 17

Conread position: 1-384
Cow position:
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 62

Conread position: 2-277
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-285
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 90

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 44

Conread position: 2-311
Cow position:
Alignm length: 318
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 90

Conread position: 2-311
Cow position:
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 93

Conread position: 2-311
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 46

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 3-311
Cow position:
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 3-311
Cow position:
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 51

Conread position: 4-311
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 30

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 184

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 308
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 246

Conread position: 13-311
Cow position:
Alignm length: 307
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 236

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 143

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 13-384
Cow position:
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 103

Conread position: 14-311
Cow position:
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 14-370
Cow position:
Alignm length: 379
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 111

Conread position: 14-384
Cow position:
Alignm length: 396
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 343

Conread position: 23-311
Cow position:
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 29-310
Cow position:
Alignm length: 292
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 29-384
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 191, 87

Conread position: 36-311
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 80, 119

Conread position: 37-310
Cow position:
Alignm length: 284
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 274

Conread position: 37-311
Cow position:
Alignm length: 284
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 53-310
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 6, 79

Conread position: 54-309
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 49

Conread position: 55-311
Cow position:
Alignm length: 267
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 57-311
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 149

Conread position: 65-384
Cow position:
Alignm length: 340
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 67-311
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 26

Conread position: 88-312
Cow position:
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 93-311
Cow position:
Alignm length: 229
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 50

Conread position: 122-311
Cow position:
Alignm length: 200
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 0

Conread position: 127-277
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 15

Conread position: 133-311
Cow position:
Alignm length: 186
Alignm identity: 153
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 53

Conread position: 144-310
Cow position:
Alignm length: 173
Alignm identity: 145
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 144-311
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 152-311
Cow position:
Alignm length: 170
Alignm identity: 139
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 154-311
Cow position:
Alignm length: 169
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 158-311
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 165-311
Cow position:
Alignm length: 157
Alignm identity: 133
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 172-311
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 174-311
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 174-311
Cow position:
Alignm length: 144
Alignm identity: 124
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 174-311
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 179-380
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 55

Show alignments to all cow chromosomes.