Cow genome map
Conread name: | rsin05_m18.y1 |
Conread position: | 1-309 |
Cow position: | chr8:27154304-27154621 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 199 |
Conread position: | 1-309 |
Cow position: | chr8:49219770-49219451 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 1-310 |
Cow position: | chr8:21252068-21251752 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 0 |
Conread position: | 1-311 |
Cow position: | chr8:1934861-1935174 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 187 |
Conread position: | 1-311 |
Cow position: | chr8:3333858-3333535 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 272 |
Conread position: | 1-311 |
Cow position: | chr8:4689227-4688907 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 1-311 |
Cow position: | chr8:8399290-8399591 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 1-311 |
Cow position: | chr8:8515256-8515576 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr8:12312059-12312372 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 242 |
Conread position: | 1-311 |
Cow position: | chr8:14589048-14589363 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 45 |
Conread position: | 1-311 |
Cow position: | chr8:14630402-14630722 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr8:14926061-14926370 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 102 |
Conread position: | 1-311 |
Cow position: | chr8:18403503-18403820 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 148 |
Conread position: | 1-311 |
Cow position: | chr8:23773462-23773145 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 97 |
Conread position: | 1-311 |
Cow position: | chr8:24913463-24913779 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 32 |
Conread position: | 1-311 |
Cow position: | chr8:29922540-29922835 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 92 |
Conread position: | 1-311 |
Cow position: | chr8:34399378-34399071 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 46 |
Conread position: | 1-311 |
Cow position: | chr8:35128969-35129289 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 50 |
Conread position: | 1-311 |
Cow position: | chr8:35472124-35471813 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 193 |
Conread position: | 1-311 |
Cow position: | chr8:42486734-42486419 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 105 |
Conread position: | 1-311 |
Cow position: | chr8:47489386-47489691 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 139 |
Conread position: | 1-311 |
Cow position: | chr8:47659493-47659809 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 1-311 |
Cow position: | chr8:49285235-49285555 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 1-311 |
Cow position: | chr8:50928278-50928591 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 242 |
Conread position: | 1-311 |
Cow position: | chr8:59260114-59260432 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 213 |
Conread position: | 1-370 |
Cow position: | chr8:8228574-8228956 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 33 |
Conread position: | 1-370 |
Cow position: | chr8:55087367-55086979 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 137 |
Conread position: | 1-378 |
Cow position: | chr8:32316757-32317142 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 350 |
Conread position: | 1-380 |
Cow position: | chr8:46059138-46059530 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 32 |
Conread position: | 1-384 |
Cow position: | chr8:12451880-12451464 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 0 |
Conread position: | 2-309 |
Cow position: | chr8:5019838-5019521 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-309 |
Cow position: | chr8:51701152-51700835 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 115 |
Conread position: | 2-310 |
Cow position: | chr8:2167692-2168006 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 244 |
Conread position: | 2-310 |
Cow position: | chr8:58183811-58184120 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 95 |
Conread position: | 2-311 |
Cow position: | chr8:4273097-4272784 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 81 |
Conread position: | 2-311 |
Cow position: | chr8:20090773-20091096 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 264 |
Conread position: | 2-311 |
Cow position: | chr8:38044306-38044622 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 2-311 |
Cow position: | chr8:38393459-38393140 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-311 |
Cow position: | chr8:38589530-38589840 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 32 |
Conread position: | 2-311 |
Cow position: | chr8:39193091-39193410 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-311 |
Cow position: | chr8:44240866-44241179 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 114 |
Conread position: | 2-311 |
Cow position: | chr8:45792923-45793242 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 2-311 |
Cow position: | chr8:47675666-47675350 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 165 |
Conread position: | 2-311 |
Cow position: | chr8:47888687-47888360 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 2-325 |
Cow position: | chr8:6492675-6492995 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 222 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 54, 16 |
Conread position: | 2-384 |
Cow position: | chr8:33591185-33590800 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 44 |
Conread position: | 3-276 |
Cow position: | chr8:32629186-32629460 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 116 |
Conread position: | 3-308 |
Cow position: | chr8:41741295-41740992 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 213 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 249, 25 |
Conread position: | 3-311 |
Cow position: | chr8:3226076-3226378 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 221 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 24, 35 |
Conread position: | 3-311 |
Cow position: | chr8:46801086-46801407 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 6-311 |
Cow position: | chr8:11777476-11777170 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 23 |
Conread position: | 13-311 |
Cow position: | chr8:1151469-1151762 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 109 |
Conread position: | 13-311 |
Cow position: | chr8:12446593-12446893 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 143 |
Conread position: | 13-311 |
Cow position: | chr8:17382299-17382604 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 0 |
Conread position: | 13-311 |
Cow position: | chr8:21154533-21154837 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 37 |
Conread position: | 13-311 |
Cow position: | chr8:29628797-29629105 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 13-311 |
Cow position: | chr8:36333499-36333804 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 0 |
Conread position: | 13-311 |
Cow position: | chr8:53837755-53837455 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 174 |
Conread position: | 13-311 |
Cow position: | chr8:55271715-55272017 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 29 |
Conread position: | 15-311 |
Cow position: | chr8:43230-43528 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 101 |
Conread position: | 15-311 |
Cow position: | chr8:1467939-1467633 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 0 |
Conread position: | 16-310 |
Cow position: | chr8:1582268-1581963 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 0 |
Conread position: | 19-311 |
Cow position: | chr8:10751152-10750854 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 203 |
Conread position: | 20-384 |
Cow position: | chr8:9640703-9640311 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 43 |
Conread position: | 29-309 |
Cow position: | chr8:51037786-51038083 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 208 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 34-311 |
Cow position: | chr8:47467879-47468164 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 36-380 |
Cow position: | chr8:18577963-18578300 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 251 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 183, 54 |
Conread position: | 38-310 |
Cow position: | chr8:11764745-11764461 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 143, 121 |
Conread position: | 38-311 |
Cow position: | chr8:29919202-29919471 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 95 |
Conread position: | 39-310 |
Cow position: | chr8:42655209-42655482 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 207 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 150, 171 |
Conread position: | 44-309 |
Cow position: | chr8:36633730-36634002 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 98 |
Conread position: | 50-311 |
Cow position: | chr8:9738311-9738044 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 148 |
Conread position: | 63-311 |
Cow position: | chr8:24191740-24191482 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 64-311 |
Cow position: | chr8:27819666-27819419 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 180 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 26, 70 |
Conread position: | 65-311 |
Cow position: | chr8:21041861-21042117 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 0 |
Conread position: | 73-311 |
Cow position: | chr8:27591025-27591255 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 189 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 182, 98 |
Conread position: | 75-311 |
Cow position: | chr8:40890556-40890785 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 183 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 103, 65 |
Conread position: | 77-310 |
Cow position: | chr8:23386012-23386248 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 172 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 174, 80 |
Conread position: | 77-311 |
Cow position: | chr8:16733540-16733307 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 134, 163 |
Conread position: | 87-311 |
Cow position: | chr8:4296856-4296627 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 31 |
Conread position: | 94-311 |
Cow position: | chr8:11604967-11604740 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 86, 58 |
Conread position: | 103-311 |
Cow position: | chr8:43541824-43542042 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 130-310 |
Cow position: | chr8:55341627-55341441 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 108, 36 |
Conread position: | 142-311 |
Cow position: | chr8:45157854-45158035 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 156-310 |
Cow position: | chr8:10740967-10741131 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 142 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 165-309 |
Cow position: | chr8:50996452-50996303 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 132 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 89, 95 |
Conread position: | 185-311 |
Cow position: | chr8:8954170-8954306 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 115 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 207-311 |
Cow position: | chr8:38088542-38088433 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 96 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 212-311 |
Cow position: | chr8:51068681-51068575 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 92 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.