Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-277
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-298
Cow position:
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-307
Cow position:
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 33

Conread position: 1-309
Cow position:
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 74

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-310
Cow position:
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 1-310
Cow position:
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 314

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 203

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 155

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 161

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 91

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 46

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 101

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 199

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-366
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 28

Conread position: 1-369
Cow position:
Alignm length: 396
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-380
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 395

Conread position: 1-384
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 200

Conread position: 2-309
Cow position:
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 169

Conread position: 2-310
Cow position:
Alignm length: 320
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position:
Alignm length: 317
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 2-311
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 217, 39

Conread position: 2-370
Cow position:
Alignm length: 392
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 26

Conread position: 3-311
Cow position:
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 3-311
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 56

Conread position: 3-311
Cow position:
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 4-276
Cow position:
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 4-310
Cow position:
Alignm length: 312
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 239

Conread position: 13-310
Cow position:
Alignm length: 308
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 187

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 220

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 19-286
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 152, 14

Conread position: 29-311
Cow position:
Alignm length: 293
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 9

Conread position: 31-294
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 37-310
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 28

Conread position: 40-311
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 180, 43

Conread position: 45-311
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 55

Conread position: 46-310
Cow position:
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 62-311
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 68

Conread position: 73-384
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 327

Conread position: 93-310
Cow position:
Alignm length: 228
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 98-277
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 156, 109

Conread position: 118-311
Cow position:
Alignm length: 204
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 121-311
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 94

Conread position: 163-311
Cow position:
Alignm length: 159
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 174-311
Cow position:
Alignm length: 148
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 176-277
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 178-310
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 182-311
Cow position:
Alignm length: 137
Alignm identity: 118
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 212-309
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 214-311
Cow position:
Alignm length: 105
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.