Cow genome map

Conread name: rsin05_m18.y1

Conread position: 1-277
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-277
Cow position:
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 116

Conread position: 1-299
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 301

Conread position: 1-304
Cow position:
Alignm length: 315
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 121

Conread position: 1-309
Cow position:
Alignm length: 319
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 34

Conread position: 1-309
Cow position:
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 10

Conread position: 1-311
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 156, 21

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 156, 175

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 63

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 49

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 169

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 35

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 238

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 211

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 176

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 49

Conread position: 1-311
Cow position:
Alignm length: 324
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 62

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 233

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 1-311
Cow position:
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 118

Conread position: 1-311
Cow position:
Alignm length: 318
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 45

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 35

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 1-311
Cow position:
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 303

Conread position: 1-311
Cow position:
Alignm length: 322
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-311
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 162

Conread position: 1-311
Cow position:
Alignm length: 319
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 250

Conread position: 1-312
Cow position:
Alignm length: 319
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-367
Cow position:
Alignm length: 373
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 27

Conread position: 1-384
Cow position:
Alignm length: 404
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 1-384
Cow position:
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 181

Conread position: 1-384
Cow position:
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 47

Conread position: 1-384
Cow position:
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 37

Conread position: 2-309
Cow position:
Alignm length: 328
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 157, 114

Conread position: 2-309
Cow position:
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 48

Conread position: 2-309
Cow position:
Alignm length: 315
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 159

Conread position: 2-310
Cow position:
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 160

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 70

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 33

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 2-311
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 236

Conread position: 2-311
Cow position:
Alignm length: 315
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 55

Conread position: 2-311
Cow position:
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 314

Conread position: 2-311
Cow position:
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 173

Conread position: 2-311
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 33

Conread position: 2-353
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 155

Conread position: 2-353
Cow position:
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 33

Conread position: 3-277
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 3-301
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 18

Conread position: 3-311
Cow position:
Alignm length: 320
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 3-311
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 30

Conread position: 3-311
Cow position:
Alignm length: 322
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 198

Conread position: 3-311
Cow position:
Alignm length: 319
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 45

Conread position: 3-311
Cow position:
Alignm length: 315
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 3-311
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 240

Conread position: 3-311
Cow position:
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 30

Conread position: 3-311
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 198, 127

Conread position: 5-311
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 142, 71

Conread position: 13-310
Cow position:
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 13-310
Cow position:
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 230

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 21

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 106

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 90

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 40

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 13-311
Cow position:
Alignm length: 306
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 13-311
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-310
Cow position:
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 198

Conread position: 14-311
Cow position:
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 14-311
Cow position:
Alignm length: 305
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 0

Conread position: 14-311
Cow position:
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 14-312
Cow position:
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 17-311
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 206, 11

Conread position: 19-311
Cow position:
Alignm length: 303
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 25-311
Cow position:
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 29-311
Cow position:
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 9

Conread position: 37-277
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 111, 6

Conread position: 39-311
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 111

Conread position: 53-280
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 5

Conread position: 68-311
Cow position:
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 103-311
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 106-384
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 154

Conread position: 117-311
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 68

Conread position: 118-384
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 19

Conread position: 133-311
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 102

Conread position: 133-311
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 133-312
Cow position:
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 144-311
Cow position:
Alignm length: 178
Alignm identity: 151
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 154-372
Cow position:
Alignm length: 229
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 157-310
Cow position:
Alignm length: 164
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 13

Conread position: 174-283
Cow position:
Alignm length: 112
Alignm identity: 98
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 68

Conread position: 174-311
Cow position:
Alignm length: 148
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 175-380
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 62

Conread position: 175-384
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 55

Conread position: 193-311
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 203-384
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 77

Conread position: 212-311
Cow position:
Alignm length: 107
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.